Detailed information on CNT30685597


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673030Triticum urartuSetaria viridis5237.6895.19104forward
CNT30617543Triticum urartuSesamum indicum459.986.6790forward
CNT3094185Triticum urartuSolanum tuberosum41.56.2584.3483forward
CNT30441947Triticum urartuAegilops tauschii50.513.2598.02101forward
CNT30647172Triticum urartuRosa chinensis4925.7983.6798forward
CNT30360803Triticum urartuLactuca sativa22.55.8491.1145forward
CNT30582481Triticum urartuEchinochloa crusgalli4720.1792.5594forward
CNT30496988Triticum urartuDigitaria exilis43991.8686forward
CNT30112153Triticum urartuFicus carica5211.5688.46104forward

Expression of CNT30685597

Peptides detected in this lncRNA

>peptide 1 (65 aa)
ARQLKLAKKVVVTGPGPLTLIHLDEHTGLVVRVGNSLIRVDALAQLLAVEEVLEKLLHFGNPGGTT

>peptide 2 (32 aa)
PDSSNLPRRLLSRVLVLSPSYTWMSTPGWLSE*

Sequence

>CNT30685597
GCCAGACAGCTCAAACTTGCCAAGAAGGTTGTTGTCACGGGTCCTGGTCCTCTCACCCTCATACACCTGGATGAGCACACCGGGCTGGTTGTCCGAGTAG
GCAACAGCCTCATCAGGGTTGATGCTCTTGCACAGCTCCTTGCCGTTGAAGAAGTCCTGGAGAAGCTGCTGCACTTTGGGAATCCTGGTGGAACCACCGA