« Back to Saccharum spontaneum search


Detailed information on CNT30450032


BLAST search results

BLAST vs Swiss-Prot:
sp|O65719|HSP7C_ARATH, E-value = 9e-76

BLAST vs NONCODE: nothing found

Expression of CNT30450032

Peptides detected in this lncRNA

>peptide 1 (96 aa)
YQVQKLINHHKFQPTTDNNDDDNSRQPRGCSTQARRRPTTNRLVDLLDLGAGAAAARGGVLVHAAGAAHVGPRALVHLGDDGAAAHRREDDRRRTA*

>peptide 2 (71 aa)
MPPAPPMSAPAPWYILAMMGLQHTGAKTTDDEPLSRPPRSWGRGRRCPRGRPRPCRRRRPCRPPRPGTSWR*

>peptide 3 (79 aa)
MPPAPPMSAPAPWYILAMMGLHSDSSSFILSSNSSASASWLASSQLMAASIASSIFFLSSPASLDAIFSSLIVLRMLYA*

>peptide 4 (29 aa)
MVILFFWPVVLSSAETFRMPLASMSKHTVI

Sequence

>CNT30450032
TACCAGGTCCAAAAATTAATTAACCACCACAAGTTCCAACCAACCACAGATAACAACGACGACGATAACTCGCGGCAGCCGAGGGGCTGCAGCACACAGG
CGCGAAGACGACCGACGACGAACCGCTTAGTCGACCTCCTCGATCTTGGGGCCGGGGCCGCCGCTGCCCGCGGGGGCGTCCTCGTCCATGCCGCCGGCGC
CGCCCATGTCGGCCCCCGCGCCCTGGTACATCTTGGCGATGATGGGGCTGCAGCACACAGGCGCGAAGACGACCGACGACGAACCGCTTAGTCGACCTCC
TCGATCTTGGGGCCGGGGCCGCCGCTGCCCGCGGGGGCGTCCTCGTCCATGCCGCCGGCGCCGCCCATGTCGGCCCCCGCGCCCTGGTACATCTTGGCGA
TGATGGGGTTGCACAGCGACTCCAGCTCCTTCATCTTGTCCTCGAACTCGTCCGCCTCCGCCAGCTGGTTGGCGTCCAGCCAGCTGATGGCCGCGTCGAT
CGCGTCCTCGATCTTCTTCTTGTCGTCGCCCGCCAGCTTGGACGCGATCTTCTCGTCCTTGATCGTGTTGCGCATGTTGTACGCGTAGTTCTCCAGCGAG
TTCTTGGACTCCACCTTCTTCTTGTGCTCCTCGTCCTCCGACTTGTACTTCTCCGCGTCCTGCACCATCTTCTCGATCTCCTCCTTGGACAGACGGCCCT
TGTCGTTGGTGATGGTGATCTTGTTCTTCTGGCCCGTCGTCTTGTCCTCGGCGGAGACGTTCAGGATGCCGTTGGCGTCGATGTCGAAGCACACCGTGAT
C