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Detailed information on CNT30441947


BLAST search results

BLAST vs Swiss-Prot:
sp|P16121|HSP70_LUPPO, E-value = 8e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Aegilops tauschiiOryza sativa33.660.3892.19256forward
CNT30673056Aegilops tauschiiSetaria viridis29.1371.1590.09222forward
CNT30520958Aegilops tauschiiSetaria italica57.7431.5689.09440forward
CNT30535317Aegilops tauschiiEucalyptus grandis36.2248.6888.04276forward
CNT30616016Aegilops tauschiiSesamum indicum29.9275.7587.72228forward
CNT30381739Aegilops tauschiiManihot esculenta51.4453.8582.14392forward
CNT30630063Aegilops tauschiiVigna unguiculata33.3342.9886.22254forward
CNT30490395Aegilops tauschiiOlea europaea41.9940.184.69320forward
CNT30283475Aegilops tauschiiTriticum aestivum47.7746.4988.46364forward
CNT30224417Aegilops tauschiiHordeum vulgare10.8921.7395.1883forward
CNT30394244Aegilops tauschiiTriticum turgidum5050.3392.13381forward
CNT30588413Aegilops tauschiiMusa acuminata23.6279.6590180forward
CNT30510893Aegilops tauschiiSolanum lycopersicum12.646.8388.5496forward
CNT30145283Aegilops tauschiiMedicago truncatula28.6163.5683.03218forward
CNT30239820Aegilops tauschiiAvena sativa8.9226.5685.2968forward
CNT30613976Aegilops tauschiiArabis alpina33.7336.7186.77257forward
CNT30450032Aegilops tauschiiSaccharum spontaneum33.8632.2190.7258forward
CNT304903Aegilops tauschiiZea mays24.838.6588.89189forward
CNT30231854Aegilops tauschiiAnanas comosus34.2596.6785.06261forward
CNT30685597Aegilops tauschiiTriticum urartu13.2550.598.02101forward
CNT30621132Aegilops tauschiiCajanus cajan17.7223.0888.89135forward
CNT30595552Aegilops tauschiiOryza meridionalis6.4321.6891.8449forward
CNT30151237Aegilops tauschiiBrachypodium distachyon28.3540.7595.37216forward
CNT30578217Aegilops tauschiiOryza barthii43.9674.6191.64335forward
CNT30582481Aegilops tauschiiEchinochloa crusgalli23.4938.4191.62179forward
CNT30496988Aegilops tauschiiDigitaria exilis5039.8588.45381forward
CNT30112153Aegilops tauschiiFicus carica43.5736.8983.13332forward
CNT30114516Aegilops tauschiiEutrema salsugineum8.5322.2692.3165forward

Expression of CNT30441947

Peptides detected in this lncRNA

>peptide 1 (41 aa)
HGITLTTRTKTITTTTQSQITIGHDIIITKQQVSATEHRLA*

>peptide 2 (29 aa)
PRNNPDHSDQNNNHHNPVSDNDRARHNNN*

>peptide 3 (72 aa)
MVILFFCPVVLSSADTFRIPLASMSKQTVIWGTPLGAGGMPDSSNLPRRLLSRVLVLSPSYTWMSTPGWLSE*

>peptide 4 (43 aa)
MPPSMSAPAPWYILAMMGLHRASSSFILSSNSSASASWRSSRP*

Sequence

>CNT30441947
CCACGGAATAACCCTGACCACTCGGACCAAAACAATAACCACCACAACCCAGTCTCAGATAACGATAGGGCACGACATAATAATAACTAAGCAGCAGGTC
TCTGCCACAGAACATCGACTAGCTTAGTCGACCTCCTCAATCTTGGGGCCAGCGCCGCCGGATGCAGCCGGGGTGTCGTCGTCCATGCCGCCCTCCATGT
CGGCGCCAGCACCCTGGTACATCTTGGCGATGATGGGGTTGCACAGGGCCTCCAGCTCCTTCATCTTGTCCTCGAACTCGTCCGCCTCAGCGAGCTGGCG
ATCTTCTCGTCCTTGATGGTGTTGCGCATGTTGTACGAGTAGTTCTCCAGGGCGTTCTTAGACTCCACCTTCTTCTTGTGCTCCTCGTCCTCAGACTTGT
ACTTCTCAGCCTCCTGGACCATCTTCTCGATCTCCTCCTTGCTCAGCCTACCCTTGTCGTTGGTGATGGTGATCTTGTTCTTCTGCCCAGTCGTCTTGTC
CTCGGCAGACACATTCAGGATACCATTGGCGTCGATGTCAAAGCAGACAGTGATCTGGGGAACTCCCCTGGGTGCAGGAGGGATGCCAGACAGCTCAAAC
TTGCCAAGGAGGTTGTTGTCACGGGTCCTGGTCCTCTCACCCTCATACACCTGGATGAGCACACCAGGCTGGTTGTCCGAGTAGGTGGAGAAGACCTGCT
CCTTCTTGGTGGGGATGGTTGTGTTCCTTGGGATCAAGACTGTCATTACACCTCCAGCCGTC