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Detailed information on CNT30616016


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Sesamum indicumOryza sativa49.535.1489.26149forward
CNT30672929Sesamum indicumSetaria viridis49.549.6785.23149forward
CNT30520958Sesamum indicumSetaria italica66.4514.3583200forward
CNT30535317Sesamum indicumEucalyptus grandis63.4633.6985.86191forward
CNT30381739Sesamum indicumManihot esculenta73.7530.4983.78222forward
CNT30630063Sesamum indicumVigna unguiculata68.4434.8686.89206forward
CNT30490395Sesamum indicumOlea europaea77.7429.3288.89234forward
CNT30283475Sesamum indicumTriticum aestivum61.4623.6383.78185forward
CNT30394244Sesamum indicumTriticum turgidum75.7530.1285.53228forward
CNT30568743Sesamum indicumActinidia chinensis25.5824.6889.6177forward
CNT30588413Sesamum indicumMusa acuminata27.5736.7384.3483forward
CNT30510893Sesamum indicumSolanum lycopersicum25.5837.5692.2177forward
CNT30145283Sesamum indicumMedicago truncatula35.5531.281.31107forward
CNT30441947Sesamum indicumAegilops tauschii75.7529.9287.72228forward
CNT30613976Sesamum indicumArabis alpina54.8223.5786.67165forward
CNT30450032Sesamum indicumSaccharum spontaneum49.518.684.56149forward
CNT30231854Sesamum indicumAnanas comosus48.8454.4481.63147forward
CNT30625111Sesamum indicumDaucus carota28.578.590.786forward
CNT30621132Sesamum indicumCajanus cajan33.8917.4489.22102forward
CNT30151237Sesamum indicumBrachypodium distachyon33.2218.8792100forward
CNT30578217Sesamum indicumOryza barthii73.7549.4487.39222forward
CNT30582481Sesamum indicumEchinochloa crusgalli21.2613.7385.9464forward
CNT30496988Sesamum indicumDigitaria exilis73.7523.2282.88222forward
CNT30112153Sesamum indicumFicus carica37.5412.5687.61113forward

Expression of CNT30616016

Peptides detected in this lncRNA

>peptide 1 (90 aa)
LFIFRFVLFCFLNHLLNLLLGEPTLVIGDCDFVLLPSGLVLSRHVQDTIGVNVKAYCNLGYSPGCRRNARELKFSKQVVGWWCSWESTQS*

>peptide 2 (48 aa)
MSKHTVIWGTPLGAGGMPESSNFPSKLLDGGVPGNQHSHDTTSCFQTKG

Sequence

>CNT30616016
CTCTTCATCTTCAGATTTGTACTTTTCTGCTTCCTGAACCATCTTCTCAATCTCCTCCTTGGAGAGCCTACCCTTGTCATTGGTGATTGTGATTTTGTTC
TTCTGCCCAGTGGTCTTGTCCTCAGCAGACACGTTCAAGATACCATTGGCGTCAATGTCAAAGCATACTGTAATTTGGGGTACTCCCCTGGGTGCAGGAG
GAATGCCAGAGAGCTCAAATTTTCCAAGCAAGTTGTTGGATGGTGGTGTTCCTGGGAATCAACACAGTCATGACACCACCAGCTGTTTCCAGACCAAGGG
A