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Detailed information on CNT30582481


BLAST search results

BLAST vs Swiss-Prot:
sp|P27322|HSP72_SOLLC, E-value = 5e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672564Echinochloa crusgalliSetaria viridis20.3917.6998.9595forward
CNT30522780Echinochloa crusgalliSetaria italica48.0726.5187.95224forward
CNT30535611Echinochloa crusgalliEucalyptus grandis35.846.6485.03167forward
CNT30616016Echinochloa crusgalliSesamum indicum13.7321.2685.9464forward
CNT3070359Echinochloa crusgalliQuercus suber36.756.0785.38171forward
CNT30381739Echinochloa crusgalliManihot esculenta20.3913.0589.4795forward
CNT30196423Echinochloa crusgalliPisum sativum38.276.0783.71178forward
CNT30283475Echinochloa crusgalliTriticum aestivum26.3915.7190.24123forward
CNT30225079Echinochloa crusgalliHordeum vulgare25.7544.2886.67120forward
CNT30394244Echinochloa crusgalliTriticum turgidum30.4718.7691.55142forward
CNT30510956Echinochloa crusgalliSolanum lycopersicum12.0220.9787.556forward
CNT30145283Echinochloa crusgalliMedicago truncatula22.7530.982.08106forward
CNT30441947Echinochloa crusgalliAegilops tauschii38.4123.4991.62179forward
CNT30614007Echinochloa crusgalliArabis alpina31.9724.6383.89149forward
CNT304903Echinochloa crusgalliZea mays100.8696.1192.34470forward
CNT30231843Echinochloa crusgalliAnanas comosus17.1734.199080forward
CNT30625077Echinochloa crusgalliDaucus carota19.125.886.5289forward
CNT30685597Echinochloa crusgalliTriticum urartu20.174792.5594forward
CNT30722154Echinochloa crusgalliTriticum spelta24.0349.7886.61112forward
CNT30424411Echinochloa crusgalliPapaver somniferum35.6220.6782.53166forward
CNT30570947Echinochloa crusgalliVitis vinifera33.9163.9784.18158forward
CNT30496988Echinochloa crusgalliDigitaria exilis21.8910.6796.08102forward
CNT30114516Echinochloa crusgalliEutrema salsugineum14.5923.2994.1268forward

Expression of CNT30582481

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GGMPESSNLPRRLLSRVLVLSPSYTWISTPGWLSE*

>peptide 2 (52 aa)
GGCRRARTCPGGCCRGSWSSHPRTPGSAHQAGCPSRWRTPAPSWWGWWCSSG*

>peptide 3 (52 aa)
MVVFLGISTVITPPAVSRPRDRGVTSSRSRNCDNSILDGASKVSFSDLTHLD*

>peptide 4 (78 aa)
RGDAGELELAQEVVVAGPGPLTLVHLDQHTRLVVRVGGEHLLLLGGDGGVPRDKHSHHTSSSLQTQGQGSDIEQKQEL*

>peptide 5 (53 aa)
MEEISSAANCFSSPLCWTTIMGFSPGPEMTLKGQSLMSLWTEASENLLPMRRLA

Sequence

>CNT30582481
AGGGGGGATGCCGGAGAGCTCGAACTTGCCCAGGAGGTTGTTGTCGCGGGTCCTGGTCCTCTCACCCTCGTACACCTGGATCAGCACACCAGGCTGGTTG
TCCGAGTAGGTGGAGAACACCTGCTCCTTCTTGGTGGGGATGGTGGTGTTCCTCGGGATAAGCACAGTCATCACACCTCCAGCAGTCTCCAGACCCAGGG
ACAGGGGAGTGACATCGAGCAGAAGCAGGAACTGTGACAACAGCATTCTTGATGGTGCTTCCAAGGTAAGCTTCAGCGATCTCACGCATCTTGATTAGAA
CCATGGAGGAGATTTCTTCAGCTGCAAACTGCTTCTCCTCACCCTTGTGCTGGACAACAATCATGGGCTTCTCACCAGGTCCAGAGATGACCTTGAAGGG
CCAGAGCTTGATGTCACTCTGGACAGAGGCATCAGAGAACCTCCTGCCGATGAGACGCTTGGCATC