SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6022 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30695084 Oryza sativa 7:27083971-27095284 (-) coding (0.129)- 62 2.69 3
CNT30695083 Oryza sativa 7:28679367-28679999 (-) noncoding (-0.119194)3e-42 (sp|Q0D3N0|PER2_ORYSJ) 54 0.22 2Conserved counterparts:
CNT30695082 Oryza sativa 7:23905381-23906779 (+) noncoding (-0.0565248)0 (sp|P35614|ERF1Z_ARATH) 67 23.08 1Conserved counterparts:
CNT30695081 Oryza sativa 7:29626675-29628855 (-) coding (0.054)0 (sp|Q0D3B6|PRR37_ORYSJ) 60 71.21 2Conserved counterparts:
CNT30695080 Oryza sativa 7:23308948-23309676 (+) noncoding (-0.02048)- 39 70.3 2
CNT30695079 Oryza sativa 7:8110180-8112794 (+) noncoding (-0.0118784)- 50 7.38 3
CNT30695078 Oryza sativa 7:21238656-21239437 (+) noncoding (-0.114278)1e-21 (sp|Q9FZ86|PDCB3_ARATH) 61 1.56 2
CNT30695077 Oryza sativa 7:29468948-29470067 (+) noncoding (-0.0909312)0.0000003 (sp|Q9M297|CLSY1_ARATH) 66 29.65 3
CNT30695074 Oryza sativa 7:8422121-8422437 (+) noncoding (-0.462848)- 38 288 1
CNT30695073 Oryza sativa 7:9591794-9592227 (+) noncoding (-0.012288)- 32 5.2 1Conserved counterparts:
CNT30695071 Oryza sativa 7:5114256-5116344 (+) noncoding (-0.110592)- 55 11.22 1Conserved counterparts:
CNT30695070 Oryza sativa 7:14993421-14996400 (-) noncoding (-0.0335872)- 93 3.23 5Conserved counterparts:
CNT30695069 Oryza sativa 7:16221149-16221909 (-) noncoding (-0.1024)1e-39 (sp|Q9SZL8|FRS5_ARATH) 50 3.27 1Conserved counterparts:
CNT30695068 Oryza sativa 7:307382-312042 (+) noncoding (-0.0684032)- 68 2.57 15
CNT30695067 Oryza sativa 7:16541021-16546135 (-) coding (0.249)- 41 10.49 5Conserved counterparts:
CNT30695066 Oryza sativa 7:4567773-4571610 (+) noncoding (-0.0167936)- 46 1.89 2Conserved counterparts:
CNT30695065 Oryza sativa 7:17595013-17596341 (+) noncoding (-0.0004096)- 37 12.1 2Conserved counterparts:
CNT30695064 Oryza sativa 7:15938296-15941040 (-) noncoding (-0.002048)- 47 5.13 3Conserved counterparts:
CNT30695063 Oryza sativa 7:6877840-6878884 (-) noncoding (-0.323584)- 41 7.98 2
CNT30695062 Oryza sativa 7:6225877-6231558 (+) coding (0.467)0 (sp|Q8RWS8|PP199_ARATH) 64 0.23 9
CNT30695061 Oryza sativa 7:13707217-13729522 (-) coding (0.333)- 59 10.77 2
CNT30695060 Oryza sativa 7:4982699-4998539 (+) coding (0.141)- 81 3.4 6
CNT30695059 Oryza sativa 7:4597567-4598866 (+) noncoding (-0.08192)- 70 2.86 2
CNT30695058 Oryza sativa 7:25018623-25019863 (+) noncoding (-0.0004096)- 55 68.88 1Conserved counterparts:
CNT30695057 Oryza sativa 7:1686263-1686574 (-) noncoding (-0.053248)0.000000000003 (sp|Q1MX30|XA21_ORYSI) 56 10.83 1
CNT30695056 Oryza sativa 7:4567741-4568127 (+) coding (0.477)- 50 351.41 2Conserved counterparts:
CNT30695055 Oryza sativa 7:22304614-22305141 (+) noncoding (-0.135168)- 33 3 1
CNT30695053 Oryza sativa 7:24078193-24080059 (+) coding (0.322)- 31 103.47 3Conserved counterparts:
CNT30695052 Oryza sativa 7:1781226-1786015 (-) noncoding (-0.02048)- 47 8.82 2
CNT30695050 Oryza sativa 7:12566119-12566843 (-) noncoding (-0.114688)- 52 10.93 2
CNT30695048 Oryza sativa 7:27747111-27747979 (-) coding (0.305)- 57 141.1 3Conserved counterparts:
CNT30695047 Oryza sativa 7:15127043-15130328 (-) noncoding (-0.0278528)- 80 2.67 3Conserved counterparts:
CNT30695046 Oryza sativa 7:10494442-10495644 (-) coding (0.194)- 31 15.17 2Conserved counterparts:
CNT30695045 Oryza sativa 7:27985757-27986293 (+) noncoding (-0.176128)- 60 8.55 3
CNT30695044 Oryza sativa 7:4143436-4144344 (-) coding (0.156)- 37 1.24 2Conserved counterparts:
CNT30695043 Oryza sativa 7:4567201-4571498 (+) noncoding (-0.086016)- 52 1.9 2Conserved counterparts:
CNT30695039 Oryza sativa 7:27062717-27087260 (-) noncoding (-0.016384)- 81 1.4 4Conserved counterparts:
CNT30695038 Oryza sativa 7:6812134-6825709 (-) noncoding (-0.0004096)- - 20.95 2Conserved counterparts:
CNT30695037 Oryza sativa 7:15359100-15360092 (-) coding (0.465)0 (sp|Q8GRT8|PIP24_ORYSJ) 72 5.39 3
CNT30695035 Oryza sativa 7:2215711-2217178 (-) noncoding (-0.012288)- 68 41.43 1Conserved counterparts:
CNT30695034 Oryza sativa 7:22313467-22317365 (+) noncoding (-0.116326)2e-19 (sp|P10707|CB2D_SOLLC) 75 0.57 3Conserved counterparts:
CNT30695033 Oryza sativa 7:16245407-16247424 (+) coding (0.295)- 62 2.02 3Conserved counterparts:
CNT30695032 Oryza sativa 7:22316402-22317930 (+) coding (0.253)6e-32 (sp|Q01667|CAB6_ARATH) 62 2078.21 2Conserved counterparts:
CNT30695031 Oryza sativa 7:2400237-2400969 (+) noncoding (-0.0733184)- 72 51.92 3
CNT30695030 Oryza sativa 7:5114256-5116344 (+) noncoding (-0.110592)- 42 5.07 2Conserved counterparts:
CNT30695027 Oryza sativa 7:10931853-10933419 (+) noncoding (-0.118784)- 42 8.04 2Conserved counterparts:
CNT30695026 Oryza sativa 7:5216156-5217030 (+) coding (0.224)6e-31 (sp|Q9T0A4|NDHS_ARATH) 77 11.76 2
CNT30695025 Oryza sativa 7:4263177-4263740 (-) noncoding (-0.166707)- 86 0.65 2Conserved counterparts:
CNT30695024 Oryza sativa 7:9797204-9797895 (-) noncoding (-0.0995328)- 50 4.91 1
CNT30695023 Oryza sativa 7:16346752-16347657 (+) noncoding (-0.0004096)- 52 3.41 2