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Detailed information on CNT30577180

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30370676	Oryza barthii	Oryza glumipatula	31.96	45.54	95.88	194	forward

Expression of CNT30577180

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LSSPCPAMSSTGRSPSPELRKPKPGATTPPRRGDSIFPLSPLPPP*

>peptide 2 (32 aa)
LFSMSGHVIHRPISLTGASQAKTWRNNSASPR*

>peptide 3 (55 aa)
SLLHVRPCHPPADLPHRSFASQNLAQQLRLAEVIPFFPFPLSLHLEINRHHHLLL*

Sequence

>CNT30577180
CTCTCTTCTCCATGTCCGGCCATGTCATCCACCGGCCGATCTCCCTCACCGGAGCTTCGCAAGCCAAAACCTGGCGCAACAACTCCGCCTCGCCGAGGTG
ATTCCATTTTTCCCCTTTCCCCTCTCCCTCCACCTTGAGATAAACCGCCACCACCACCTTCTCTTATAGCCGGAGCTGAGCTCTTTTCGCCGCCGTTCCG
GCCATCTCCCTCTTTCTCTTGGCTAGCTACCACCCTCCCCAAGTGCGCGTCGCCCGGGAACACGATATACCGCCGACGTCGCCGCACTTTGGCCACTGGA
AGCCCGTCGCCCCGCTCGCCCTCTTCTCTAGCTCTCTCTCGGCTGCTAACAGAAGAGGAGAAGGAGGTGACGGGAGGAAGAAGAAGAGAAAGAAAAAGAA
AAGAGAAAAAGGCTGACAGAGTCTATTTGGAGTTTTTGCCGAAGCTGGGAGTTCAATCACATAAGTTAGTTCCCTTTAAACCTAGTCTTCAAGTCTAGTA
TAGTTAGATGGTTTAATTCTATAGTAAAACGGCAGAGTTGAGTCATCGTATAGCTTCTGCTGTAATAGTTAGCCACAAGCTTGTAAATGTCCTATTATTT
TATATAC