« Back to Setaria italica search


Detailed information on CNT30520570


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SDM1|CB121_HORVU, E-value = 7e-31

BLAST vs NONCODE: nothing found

Expression of CNT30520570

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MVVWSGSLRWVAQLLSGPLPVAAACTAKPRKATMARRACLISASCSRSFFSGSAARPSGSK*

>peptide 2 (56 aa)
MKQFWCTYVYIHTLPASCQVTPVSHSTERAPRVASMAQRPWMSSHSRKRWRPKTSL*

>peptide 3 (48 aa)
CTSECINSSLVHILQITSPHQQALLINETSINKLSDRSSHHTLSLITK*

>peptide 4 (29 aa)
MCSPRRPPTKPWLLLLLLLLGVLRASGGGG

Sequence

>CNT30520570
TGTACAAGTGAATGCATTAATTCATCACTGGTTCATATATTACAAATCACAAGTCCCCATCAGCAAGCTCTCCTAATTAACGAGACCTCCATTAACAAAC
TATCGGATCGATCTTCCCACCATACCCTCTCACTCATCACAAAATGATATCACGCACGCATGGGTTCATCCATCTCCGCCAGCTGATAGAGATCACAGTT
AATTAATTCAAGAACACGTTTCGATCGATGGACGACGGAGCAATGGCGGCTTAAGAGGATCCTCCGAACGTGTCGAAGATGGTGGTGTGGAGCGGGTCGC
TGAGGTGGGTGGCCCAGTTGTTGAGCGGGCCCTTGCCGGTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGCGCGTGCTTGAT
CTCCGCCAGCTGCAGCCGCTCCTTCTTCTCCGGGTCGGCCGCCAGGCCGAGCGGGTCGAAGTAGGAGCCGCCCGGGTAGAGCCTCTTCTCCGGGTCGAGC
TCGGCGTTGCGCTGGAACTCGATGTAGCCGATCACGAGCACCTCGATCCAGATGAGTGTCGAGATGGAGAAGGGCAGCGGCTGCCCCAGGTAGGACGACC
CGTCCACAAGCTCAACCTGCCAGCCATCAATAACGTTCAGGTTAGACGCTTGCATAAGGATGGAATGAAACAATTTTGGTGCACATATGTATATATACAT
ACCTTGCCGGCGTCCTGCCAGGTGACGCCGGTGAGCCACTCGACGGAGAGGGCGCCGAGGGTGGCGAGCATGGCCCAGCGGCCGTGGATGAGCTCGCACT
CGCGGAAACGCTGGAGGCCGAAGACCTCGCTGTAGGGCTGGAACGGGGTGGACTTGACGTCGGAGGACTCGAAGCGGGTGCCCAGGAATGTGCTCGCCGC
GGCGGCCACCGACGAAGCCATGGCTGCTGCTCCTCCTCCTCCTCCTGGGTGTGCTGAGAGCGTCAGGTGGTGGTGGTG