CANTATAdb - search

Detailed information on CNT30117210

BLAST search results

BLAST vs Swiss-Prot:
sp|Q7F1U0|PER22_ORYSJ, E-value = 6e-61

BLAST vs NONCODE: nothing found

Expression of CNT30117210

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKVMRRPQLAARYWQQCRGLALFPETITYSSSPAS*

>peptide 2 (36 aa)
NHRRGQIARAEKSREGPIHSKLALHLVNTTVEICSC*

>peptide 3 (50 aa)
MFPIFTMAAVKALLNAAVLEEKFLTVLSVLPPLKSTWSECRRPLLDSRLV*

>peptide 4 (29 aa)
MATRYMTSHMHTPTLSSLFRALADETIEP*

>peptide 5 (29 aa)
MKPLNHESDETATASCTLLAAMSGPSFIP*

Sequence

>CNT30117210
GAAACCATCGCAGAGGCCAGATCGCCAGAGCAGAGAAGAGCAGAGAGGGGCCAATACATTCGAAACTAGCACTTCACTTGGTTAACACGACAGTTGAAAT
CTGTAGCTGCTAGGATTACGACGAAAGAGAGGTCCGTAATCCTCATGCCTTTGCATGGCAACTCGTTACATGACATCACACATGCATACACCTACACTCT
CTAGTCTGTTCCGTGCACTTGCTGATGAAACCATTGAACCATGAAAGTGATGAGACGGCCACAGCTAGCTGCACGCTATTGGCAGCAATGTCGGGGCCTA
GCTTTATTCCCTGAGACCATCACGTACTCGTCATCACCAGCTAGTTAACCTTGGAGCAGTTGAGCCTGATCTGCCCCTGGGTTCCAGTCAAGGGCGAGAT
GTTCCCCATCTTCACCATGGCCGCCGTGAAGGCGCTGTTGAACGCCGCCGTGTTGGAGGAGAAGTTCCTGACCGTGTTGTCCGTGCTGCCGCCGTTGAAG
AGCACCTGGTCGGAGTGCAGGAGGCCCTTGTTGGACAGCAGGTTGGTGTAGTAGGCGCTGTCGAAGGCGTTGGGCGTCGTCGTGTCCAGCGGCGCCAGGT
TGCTGTCGCCGCTGCCCGTCGGCCGTGGGCAGTTGGCCTGGCGTTGCGTCGCGAAGGCGGAATCGATGTTGGTCTCGTTGTAGATCCTGTCC