SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30523675 Setaria italica VI:24062671-24201704 (-) noncoding (-0.02048)6e-21 (sp|P01540|THNA_PHOLI) 55 2.39 5
CNT30523674 Setaria italica VI:3499919-3500659 (-) noncoding (-0.036864)- - 0.49 2
CNT30523673 Setaria italica VI:30664723-30667154 (+) noncoding (-0.0262144)- 58 5.75 4
CNT30523672 Setaria italica VI:4431767-4433126 (+) coding (0.137)5e-60 (sp|A0A0P0XBU0|CCA1_ORYSJ) 49 0.65 2
CNT30523671 Setaria italica VI:6980407-6980822 (+) noncoding (-0.012288)- 54 0 2
CNT30523668 Setaria italica VI:7978780-7979477 (-) coding (0.276)- 63 1.41 2Conserved counterparts:
CNT30523667 Setaria italica VI:24062571-24201612 (-) coding (0.037)2e-21 (sp|P01540|THNA_PHOLI) 41 23.84 4
CNT30523666 Setaria italica VI:31785149-31787197 (-) coding (0.177)- 93 4.18 2
CNT30523664 Setaria italica VI:21487084-21487665 (-) noncoding (-0.004096)- 31 3.5 2Conserved counterparts:
CNT30523662 Setaria italica VI:31116302-31118840 (-) coding (0.295)- 80 3.61 2
CNT30523661 Setaria italica VI:24064450-24158585 (-) coding (0.071)- 43 5.88 3
CNT30523659 Setaria italica VI:32974895-32975357 (-) noncoding (-0.110592)- 58 0.63 2
CNT30523658 Setaria italica VI:32354435-32355573 (-) coding (0.269)9e-46 (sp|Q84PD8|SAP11_ORYSJ) 93 1296.46 2Conserved counterparts:
CNT30523657 Setaria italica VI:389632-394544 (+) coding (0.258)6e-35 (sp|Q0J8M2|FER1_ORYSJ) 54 0.48 2Conserved counterparts:
CNT30523656 Setaria italica VI:16217133-16256102 (-) noncoding (-0.098304)- 69 21.17 2
CNT30523655 Setaria italica VI:5290235-5292237 (+) coding (0.18)- 56 20.6 2Conserved counterparts:
CNT30523654 Setaria italica VI:20988325-20989358 (+) noncoding (-0.0905216)- 52 0 2
CNT30523652 Setaria italica VI:1076635-1171493 (-) coding (0.156)- 85 0.57 3
CNT30523651 Setaria italica VI:4431785-4433092 (+) noncoding (-0.028672)1e-54 (sp|A0A0P0XBU0|CCA1_ORYSJ) 49 0.49 3
CNT30523650 Setaria italica VI:31136648-31137816 (-) coding (0.185)- 68 0.75 3
CNT30523649 Setaria italica VI:4521773-4522280 (-) noncoding (-0.0335872)- 97 8.55 2
CNT30523648 Setaria italica VI:24063221-24202407 (-) noncoding (-0.06144)- 33 1.16 5
CNT30523647 Setaria italica VI:7978831-7979479 (-) coding (0.202)- 48 0 2Conserved counterparts:
CNT30523646 Setaria italica VI:31986890-31991377 (+) coding (0.215)- 83 4.44 4
CNT30523645 Setaria italica VI:16853353-16853622 (+) noncoding (-0.146227)- 90 105.33 1
CNT30523644 Setaria italica VI:23889301-23896644 (+) coding (0.228)- 70 3.3 2
CNT30523643 Setaria italica VI:30238810-30239927 (-) coding (0.335)6e-41 (sp|P16081|NIA1_ORYSJ) 92 523.24 2
CNT30523642 Setaria italica VI:24062660-24157580 (-) noncoding (-0.02048)3e-20 (sp|P01540|THNA_PHOLI) 47 2 4
CNT30523640 Setaria italica VI:23436995-23437990 (+) noncoding (-0.0004096)- 65 6.98 2
CNT30523639 Setaria italica VI:389739-390357 (+) noncoding (-0.0311296)4e-19 (sp|P83522|FER_HORVU) - 0.26 2Conserved counterparts:
CNT30523636 Setaria italica VI:9483952-9485254 (+) noncoding (-0.006144)- 62 13.03 2
CNT30523635 Setaria italica VI:52806-58149 (+) noncoding (-0.0151552)- 80 5.26 2
CNT30523634 Setaria italica VI:35576386-35577942 (-) coding (0.107)- 70 32.59 2
CNT30523633 Setaria italica VI:23115725-23125538 (+) noncoding (-0.0069632)- 98 1.07 3
CNT30523632 Setaria italica VI:31986890-31991377 (+) coding (0.215)- 83 6.34 4
CNT30523631 Setaria italica VI:24062671-24121528 (-) noncoding (-0.02048)2e-20 (sp|P01540|THNA_PHOLI) 53 0.99 3
CNT30523630 Setaria italica VI:4464310-4465174 (-) coding (0.295)5e-53 (sp|A0A3Q7I9E2|CTOMT_SOLLC) 79 699.43 2
CNT30523629 Setaria italica VI:4704151-4704455 (-) noncoding (-0.0843776)- - 20.84 2Conserved counterparts:
CNT30523627 Setaria italica VI:24062651-24201788 (-) coding (0.008)9e-21 (sp|P01540|THNA_PHOLI) 62 4.41 5
CNT30523626 Setaria italica VI:28787098-28802623 (+) coding (0.509)- 79 0.44 2
CNT30523623 Setaria italica VI:6349350-6436903 (+) noncoding (-0.028672)- 73 0.83 2
CNT30523621 Setaria italica VI:32064853-32085463 (+) noncoding (-0.0290816)6e-81 (sp|A2YWQ1|HSP81_ORYSI) 84 39.57 3Conserved counterparts:
CNT30523620 Setaria italica VI:24157677-24202420 (-) noncoding (-0.0004096)- 52 1.53 2
CNT30523619 Setaria italica VI:389724-394585 (+) coding (0.282)7e-40 (sp|Q0J8M2|FER1_ORYSJ) - 1.08 2Conserved counterparts:
CNT30523615 Setaria italica VI:24063180-24202376 (-) noncoding (-0.04096)- 43 5.85 3
CNT30523613 Setaria italica VI:35971298-35972299 (-) noncoding (-0.110592)- 51 11.94 2
CNT30523612 Setaria italica VI:33668742-33695761 (-) noncoding (-0.116736)8e-49 (sp|Q687E1|NPP_HORVU) 80 36.23 3
CNT30523609 Setaria italica VI:24063221-24158216 (-) noncoding (-0.06144)- 33 0 4
CNT30523606 Setaria italica VI:24063184-24203718 (-) coding (0.24)- 35 22.21 3
CNT30523603 Setaria italica VI:32145993-32150354 (+) noncoding (-0.0622592)4e-55 (sp|A0A1D6E0S8|WAK17_MAIZE) 79 1.51 2