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Detailed information on CNT30596773


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0J8M2|FER1_ORYSJ, E-value = 1e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695212Oryza meridionalisOryza sativa91.8186.4393.55605forward
CNT30192541Oryza meridionalisSecale cereale25.4917.2891.07168forward
CNT30308049Oryza meridionalisTriticum aestivum25.4925.3491.67168forward
CNT30226851Oryza meridionalisHordeum vulgare25.3424.8591.62167forward
CNT30400520Oryza meridionalisTriticum turgidum25.3422.6691.02167forward
CNT30248096Oryza meridionalisAvena sativa18.5122.4387.7122forward
CNT30670383Oryza meridionalisTriticum dicoccoides25.3456.4291.62167forward
CNT30683915Oryza meridionalisTriticum urartu25.4919.8191.67168forward
CNT30370840Oryza meridionalisOryza glumipatula91.8184.0393.55605forward
CNT30551485Oryza meridionalisOryza brachyantha35.229.8292.24232forward

Expression of CNT30596773

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MYTSSGTCSSTSPSGVISFTLYVACIRSLSPSLLLAGSTDTRAGAGAAATRRDMGNRTWLLSAVAAMAIAN*

Sequence

>CNT30596773
ATATATATATATATATATATATATGACACCAAAATGTGATATGAATATGATTAATTAAGCAGCTGCAGCAAAACGTACATTAATTAAACAACAATAATTA
ACCCTCGGGCACGCCTGTGTTTTGTTATCTCGCTCAACATATACGTACGTAGTACTTTGCTTGCATAGGGACGACGACATTATATTCTTAATTGATAAAC
TCAAGAACGCATGGAGATCGATCGATCGATCGAGAGATTTATAAATATGGAGCTTGCTTGATTGATTGATTAGATGAGGTCGTCCTCCTTGTGGGTCTCG
ATGACGACGTCGGACTTGGGGTAGGCGTGGCAGGAGTAAGGCAGGTCGATCCCTTCCTCCTCCGCCTGGTCCAGGATGTACACGTCGTCCGGCACCTGCA
GCTCCACCTCGCCATCGGGGGTGATCAGCTTCACGTTGTACGTCGCCTGCATCCGCAGCCTCTCCCCGAGCTTGCTGCTCGCCGGCAGCACCGACACGCG
CGCCGGCGCCGGAGCCGCCGCCACCCGCAGGGACATGGGCAACCGGACCTGGCTGCTCAGTGCCGTCGCCGCCATGGCTATAGCTAATTAAGCTAGCTAG
CTGCTGCTGCTAGGTAAGGTAGAGGAGGAGGAGGAGAGGTCGTCGCAAACTGAGCTTGA