Detailed information on CNT30604510


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675647Oryza punctataSetaria viridis16.9122.0190.29103forward
CNT30523639Oryza punctataSetaria italica16.9125.6289.32103forward
CNT30307305Oryza punctataTriticum aestivum15.2722.4686.0293forward
CNT30248543Oryza punctataAvena sativa15.2724.3590.3293forward
CNT30469592Oryza punctataSaccharum spontaneum16.4221.7987100forward
CNT30117439Oryza punctataOryza nivara19.0520.4992.24116forward
CNT30558154Oryza punctataPanicum hallii15.2724.0388.1793forward

Expression of CNT30604510

Peptides detected in this lncRNA

>peptide 1 (32 aa)
IYRQFIHTQFNTDNLRFWPRHYSYTNNSVANN*

Sequence

>CNT30604510
TATATATAGACAATTCATACACACACAATTCAACACAGACAATTTAAGATTTTGGCCTCGGCATTATTCATACACGAACAATTCAGTAGCAAATAATTAA
TACGCGGAGTATATATAGACACACGAGTACGTAGAGCTAGGATATATATAAAATTGTTGTTTCAAATACATGGAGTACGTATTTGACAGTAGCAAACAGC
AGTATAATCAACAGCACCAAAAAGTGATAGTAGTAAATATGATTAATTAAGCAGCTGCAGCGCAACAATAATTAATTAAACAACAAACCCGCGGGCAAGT
ATGCCTGTGTTTTTTTTATCTCGCTCAACATATATAAATATATAGTTTGCATGCATATATGGAGATAGATATATAGTAGCAATGTATTTTGGTTGCATGC
TAGCTAGGGACGGACGACATTAATTAATCGATAAACTGAAGAGATGATGAGATGCATGCATGGAGAGATTTATAGAGCTTAATGAAGCTAGAAGCTTGCT
TAATTAGATGAGGTCGTCCTCCTTGTGGGTCTCGATGACGACGTCGGATTTGGGGTAGGCGTGGCAGGTGAGCACCCATCCGGCGCCCATCTGTTCGTCG
TCGAGGAAG