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Detailed information on CNT30695475


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0J8M2|FER1_ORYSJ, E-value = 5e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675565Oryza sativaSetaria viridis30.3662.0489.55201forward
CNT30523619Oryza sativaSetaria italica31.2729.788.41207forward
CNT30193074Oryza sativaSecale cereale28.729.5591.05190forward
CNT30307054Oryza sativaTriticum aestivum28.5524.0890.48189forward
CNT30227182Oryza sativaHordeum vulgare28.720.1390190forward
CNT30398821Oryza sativaTriticum turgidum28.721.1390.53190forward
CNT30442771Oryza sativaAegilops tauschii28.732.3191.05190forward
CNT30256898Oryza sativaAvena sativa28.722.5989.47190forward
CNT30670303Oryza sativaTriticum dicoccoides28.5531.7191.01189forward
CNT30468260Oryza sativaSaccharum spontaneum28.727.192.11190forward
CNT30140637Oryza sativaLolium perenne28.728.3285.79190forward
CNT3010346Oryza sativaZea mays28.730.8491.05190forward
CNT30683971Oryza sativaTriticum urartu28.728.791.05190forward
CNT30343859Oryza sativaEragrostis tef28.728.5390.53190forward
CNT30366929Oryza sativaSorghum bicolor24.7733.5493.9164forward
CNT30370873Oryza sativaOryza glumipatula10088.0399.7662forward
CNT30584932Oryza sativaEchinochloa crusgalli28.736.0592.63190forward
CNT30498059Oryza sativaDigitaria exilis28.5525.5189.42189forward
CNT30595007Oryza sativaEragrostis curvula28.727.7487.37190forward
CNT30558096Oryza sativaPanicum hallii28.723.4990190forward
CNT30551540Oryza sativaOryza brachyantha40.0332.6891.7265forward

Expression of CNT30695475

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MYTSSGTCSSTSPSGVISFTLYVACIRSLSPSLLLAGSTDTRAGAGAVATRRDIGNRTWLLSAVAAMAAIAN*

>peptide 2 (32 aa)
MRSSSLWLWSDWSISPETTLPAQEEQEPARQE*

Sequence

>CNT30695475
ACACAGTAATGCATGCATATATGACACCAAAATGTGATATGGATATGATTAAGCAGGTGCAGCAAAACGTACATTAATTAAACAACAACAATTAACCCTC
GGGCACGCCTGTGTTTTGTTATCTCGCTCAACATATACGTACGTAATACTTTGCTTGCATAGCATAGGGACGACGACATTATATTCTTAATTGATAAACT
CAAGAACGCATGGAGATGGATCGAGAGATTTATAAATATGGAGCTTGCTTGATTGATTAGATGAGGTCGTCCTCCTTGTGGCTCTGGTCGGACTGGTCGA
TCTCGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCCGCGCGGCAGGAGTAAGGCAGGTCGATCCCTTCCTCCTCCGCCTGGTCCAGGATGTA
CACGTCGTCCGGCACCTGCAGCTCCACCTCGCCGTCCGGTGTGATCAGCTTCACGTTGTACGTCGCCTGCATCCGCAGCCTGTCTCCCAGCTTGTTGCTC
GCCGGCAGCACCGACACGCGCGCCGGCGCCGGCGCCGTCGCCACCCGCAGGGACATCGGCAACCGGACCTGGCTGCTCAGTGCCGTCGCCGCCATGGCTG
CTATAGCTAATTAAGCTAGCTAGCTGCTGCTGCTAGGTAAGGTAGACGAGGAGGAGAGGAGT