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Detailed information on CNT30117323


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0J8M2|FER1_ORYSJ, E-value = 4e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675647Oryza nivaraSetaria viridis24.4139.7490.86186forward
CNT30304725Oryza nivaraTriticum aestivum23.128.992.61176forward
CNT3010833Oryza nivaraZea mays23.126.0490.34176forward
CNT30366722Oryza nivaraSorghum bicolor2119.3590.62160forward
CNT30102959Oryza nivaraOryza rufipogon51.8453.5299.49395forward

Expression of CNT30117323

Peptides detected in this lncRNA

>peptide 1 (47 aa)
IYSLLINCSFKYMEYVFDSSIYDTVMHAYMTPKCDMDMIKQVQQNVH*

Sequence

>CNT30117323
GATATATAGCTTATTAATTAACTGTTCTTTCAAATACATGGAGTACGTATTTGACAGTAGTATATATGACACAGTAATGCATGCATATATGACACCAAAA
TGTGATATGGATATGATTAAGCAGGTGCAGCAAAACGTACATTAATTAAACAACAACAATTAACCCTCGGGCACGCCTGTGTTTTGTTATCTCGCTCAAC
GTATACGTACGTAATACTTTGCTTGCATAGCATAGGGACGACGACATTATATTCTTAATTGATAAACTCAAGAACGCATGGAGATGGATTGAGAGATTTA
TAAATATGGAGCTTGCTTGATTGATTAGATGAGGTCGTCCTCCTTGTGGGTCTCGATGACGACGTCGGACTTGGGGTAGGCGTGGCAGGTGAGGACCCAG
CCGGCGGCAACCTGGTCGTCGTCGAGGAAGCTCTGGTCGGACTGGTCGATCTCGCCGGAGACCACCTTGCCGGCGCAGGAGGAGCAGGAGCCCGCGCGGC
AGGAGTAAGGCAGCTCCACCTCGCCGTCCGGTGTGATCAGCTTCACGTTGTACGTCGCCTGCATCCGCAGCCTGTCTCCCAGCTTGTTGCTCGCCGGCAG
CACCGACACGCGCGCCGGCGCCGGCGCCGTCGCCACCCGCAGGGACATCGGCAACCGGACCTGGCTGCTCAGTGCCGTCGCCGCCATGGCTGCTATAGCT
AATTAAGCTAGCTAGCTGCTGCTGCTAGGTAAGGTAGACGAGGAGGAGAGGAGTGAGCTAGC