CANTATAdb - search

Detailed information on CNT30117496

BLAST search results

BLAST vs Swiss-Prot:
sp|Q84PD8|SAP11_ORYSJ, E-value = 6e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672179	Oryza nivara	Setaria viridis	18.92	52.08	89.14	175	forward
CNT30523258	Oryza nivara	Setaria italica	21.51	17.82	89.95	199	forward
CNT30533125	Oryza nivara	Eucalyptus grandis	11.35	20.19	85.71	105	forward
CNT30444092	Oryza nivara	Aegilops tauschii	21.3	24.35	91.37	197	forward
CNT30255362	Oryza nivara	Avena sativa	23.03	18.49	91.08	213	forward
CNT30468767	Oryza nivara	Saccharum spontaneum	21.3	11.8	88.83	197	forward
CNT30141231	Oryza nivara	Lolium perenne	23.03	20.76	89.67	213	forward
CNT3067877	Oryza nivara	Leersia perrieri	24.22	21.19	94.64	224	forward
CNT30330555	Oryza nivara	Dioscorea rotundata	9.3	27.83	87.21	86	forward
CNT30103028	Oryza nivara	Oryza rufipogon	28.11	10.18	100	260	forward

Expression of CNT30117496

Sequence

>CNT30117496
CCACTAGCTCAAGCTGATAATAATGCTCTCCACAGATAATAATAAATTTTATACAAAAGGGAATTAAAATTAAATAGAGATTTGTGGGAGGACAACACAA
CAACCCCATCTTCTTCCTTCCTCCCTCTTTCCATCCAACTTCCAACCTCAACCACCACTACAACAACATCATCATCATCATATTGTTCTTCCTTTGCTTG
ATGCATCTTGAGTCACCCATCTCATCTCCTTTTCTTTTTCTTTCTTTTTTTTTCCCCTTTCACCTTTAAGAAGCTCTCAGGAAAAGAAAAAATAATACCC
TCAACTTTAATTTTTAAAAGGAAAGAAGAAGAAAAAAGAAAGAAAAAAGGAGGAAAATTCAGGTTGGTTTCCCCTTGTATTATCCTTTTAGAACCTAACG
ATCTTGGCGGCGCGGACGACGGGGTTCTCCCTGGCGATGGCGTCCCTCGCCGCCGACTTGTAGTCGAAGCTGCAGTCGTGGCGGTCGGAGTACCGGTGCG
CGCCGCAGTAGAGCTCGCCGCAGCGGCACCGGAACCCGGTCAGGCCCACCCGCCTCCGGCAGCTGTGGCATCGGTTGACCGACGACGACCTCGACGCCTT
CGACGACGACTCCACCGGCCCCGCCGTCGGCCGCTCAACCACCAGCGCCACCGCCGCCGCCGCCGACGACTGTACGGCCTGCCTCGGCTTCTCCACCACC
GGAAACACCGGCAACGACGTCGTCGACGGCGAGGCAGCCAAGAAGCAGTTCTGGCAGAGGTTGTTGGTCGCCGGGTTGCCCGGGAACCCGCAGCTGTTGG
CGCAGAGCGTCATCTCCGGCGCCCTCAGCTCCGTCGGCTCCTCCACCTTCTTCTCCCTCTGCGCCATGATCGAATCCGAGAGAGAGACGAAGCGAGCTTA
GGTTCGCTTTGCTTTTGGGAATGGG