Detailed information on CNT30103103


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187977Oryza rufipogonSecale cereale20.559.2891.0467forward
CNT30554643Oryza rufipogonOryza glaberrima50.6134.7498.79165forward
CNT30370845Oryza rufipogonOryza glumipatula55.8333.0999.45182forward

Expression of CNT30103103

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVYFRCEGFDEGKKKETRLVDLLHLALAGVVLERRHVGV

Sequence

>CNT30103103
GTGGAATTGAGGCAGAAGAATATTCGCAAAATTAATTGATACATCTAACTTGCAGAGGAAAAAATAGACAACTCATGAGGACACTAATATAATACTCATA
TTTAGCAATATAATTAACGTACGCAGTTCGAGAACCCATAGCACAATCTAGCCCCATGCATTGCAGGCTAGGTAAAGGTAAAACAGATAAGCTAGCTCCA
ATGCTCCATGGTGTACTTTCGCTGCGAAGGATTTGACGAGGGGAAAAAAAAGGAAACCCGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCGGCGTCGTC
CTCGAGCGGCGGCATGTCGGTGTCGG