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Detailed information on CNT30721349


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677509Triticum speltaSetaria viridis49.6717.5794.63149forward
CNT30522212Triticum speltaSetaria italica49.6761.3294.63149forward
CNT30547605Triticum speltaIpomoea triloba91.3349.9187.23274forward
CNT3071006Triticum speltaQuercus suber47.6729.6183.92143forward
CNT30712809Triticum speltaGlycine max4943.8888.44147forward
CNT30177039Triticum speltaSecale cereale10022.0995300forward
CNT30296001Triticum speltaTriticum aestivum9672.1896.53288forward
CNT30220716Triticum speltaHordeum vulgare7610093.86228forward
CNT30383371Triticum speltaTriticum turgidum97.6797.9995.56293forward
CNT30435344Triticum speltaAegilops tauschii10096.4694.67300forward
CNT30136247Triticum speltaLolium perenne98.3396.4193.56295forward
CNT30229091Triticum speltaAnanas comosus4436.8781.82132forward
CNT30655223Triticum speltaRosa chinensis37.6744.4984.07113forward
CNT30683531Triticum speltaTriticum urartu10097.72100300forward
CNT30619808Triticum speltaCajanus cajan47.3323.8785.92142forward
CNT30596030Triticum speltaOryza meridionalis5163.7593.46153forward
CNT30371253Triticum speltaOryza glumipatula98.3396.0993.22295forward
CNT30331462Triticum speltaDioscorea rotundata42.6724.985.94128forward
CNT30575848Triticum speltaOryza barthii45.3315.1394.12136forward
CNT30174517Triticum speltaVigna angularis45.6768.1683.21137forward
CNT30726253Triticum speltaLupinus angustifolius49.3340.6686.49148forward
CNT3065151Triticum speltaSelaginella moellendorffii22.6733.0185.2968forward
CNT3040082Triticum speltaMarchantia polymorpha50.6736.1983.55152forward

Expression of CNT30721349

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLGAQCQGSGGRCHRWPHCQGGQPHQCAQGESGWTGHCCMAQQQRDAQGEENQGQSQFHLQQR*

>peptide 2 (76 aa)
MASLSRRTATSVCSRREWVDRTLLYGSTTERRSRRREPRPEPVPPPTALKTRNPWRPVQLSASFLIRSRHRSTISLP

>peptide 3 (92 aa)
NEPIEVGVCWALNVKGAAADVIDGLIVKEDSHISVLKERVGGQDTVVWLNNRETLKEKRTKARASSTSNSVEDKEPLETSAVVCKLPDTVKA*

Sequence

>CNT30721349
AAACGAGCCTATTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGCCTCATTGTCAAGGAGGACAGCCACATC
AGTGTGCTCAAGGAGAGAGTGGGTGGACAGGACACTGTTGTATGGCTCAACAACAGAGAGACGCTCAAGGAGAAGAGAACCAAGGCCAGAGCCAGTTCCA
CCTCCAACAGCGTTGAAGACAAGGAACCCCTGGAGACCAGTGCAGTTGTCTGCAAGCTTCCTGATACGGTCAAGGCATAGGTCAACAATCTCCTTGCCAA