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Detailed information on CNT30136247


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Lolium perenneOryza sativa33.6620.7288.35103forward
CNT30522212Lolium perenneSetaria italica51.3164.6191.08157forward
CNT30640127Lolium perenneNymphaea colorata53.2720.4386.5163forward
CNT30547605Lolium perenneIpomoea triloba86.648.2785.28265forward
CNT30517675Lolium perenneJuglans regia42.8121.6985.5131forward
CNT3021397Lolium perenneCitrullus lanatus22.2210.2786.7668forward
CNT3071006Lolium perenneQuercus suber52.2933.1383.12160forward
CNT30403515Lolium perenneBeta vulgaris49.0258.3787.33150forward
CNT30712809Lolium perenneGlycine max48.3744.1885.81148forward
CNT30177039Lolium perenneSecale cereale10022.5392.48306forward
CNT30283673Lolium perenneTriticum aestivum10099.3592.48306forward
CNT30220716Lolium perenneHordeum vulgare74.5110091.23228forward
CNT30383371Lolium perenneTriticum turgidum97.7110092.31299forward
CNT30237104Lolium perenneBrassica oleracea35.2933.3386.11108forward
CNT30555279Lolium perenneOryza glaberrima47.3946.4791.72145forward
CNT30435344Lolium perenneAegilops tauschii10098.3991.5306forward
CNT3059767Lolium perenneArabidopsis lyrata31.713.6884.5497forward
CNT3075316Lolium perenneBrassica juncea44.7746.1386.13137forward
CNT30265527Lolium perenneBrassica rapa48.3724.0384.46148forward
CNT30611949Lolium perenneArabis alpina37.5833.2489.57115forward
CNT30228Lolium perenneZea mays49.0220.0390.67150forward
CNT30606894Lolium perenneGossypium raimondii45.7538.3688.57140forward
CNT30229091Lolium perenneAnanas comosus43.1436.8780.3132forward
CNT30655223Lolium perenneRosa chinensis38.2446.0682.91117forward
CNT30683531Lolium perenneTriticum urartu10099.6793.14306forward
CNT30721349Lolium perenneTriticum spelta96.4198.3393.56295forward
CNT30619808Lolium perenneCajanus cajan46.4123.8785.21142forward
CNT30597159Lolium perenneOryza meridionalis48.3720.4491.89148forward
CNT30360524Lolium perenneLactuca sativa30.0714.3584.7892forward
CNT30371253Lolium perenneOryza glumipatula10099.6789.87306forward
CNT30704384Lolium perennePrunus avium31.0517.0685.2695forward
CNT3052700Lolium perenneAmborella trichopoda31.0530.0686.3295forward
CNT30106559Lolium perenneOryza longistaminata21.929.9189.5567forward
CNT30147962Lolium perenneBrachypodium distachyon47.0642.4892.36144forward
CNT30174517Lolium perenneVigna angularis44.7768.1681.02137forward
CNT30726253Lolium perenneLupinus angustifolius48.0440.3885.71147forward
CNT3040082Lolium perenneMarchantia polymorpha53.2738.8184.05163forward

Expression of CNT30136247

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LRHKPVEVGVSGTFNVQGAAAYVIDSLIVKKDSHISVL*

Sequence

>CNT30136247
CCTGAGACACAAGCCTGTTGAGGTTGGTGTAAGTGGGACGTTCAATGTCCAGGGAGCGGCGGCATATGTCATAGATAGCCTCATTGTCAAGAAGGACAGC
CACATCAGTGTGCTCTAGAAGAGAGTGGGTGGACAGCACACTGTTGTATGGCTCAACAACAGAGAGCCGCTCAAGGAGAAGAGAACCAAGGCCAGAGCCA
GTTCCACCTCCAACAGCGTTGAAGACTAGGAAGCCCTGGAGCCCAGTGCAGTTGTCTGCAAGCTTCCTGATGCGGTCAAGGCAGAGATCAACAATCTCCT
TGCCAA