« Back to Lupinus angustifolius search


Detailed information on CNT30726253


BLAST search results

BLAST vs Swiss-Prot:
sp|Q96460|TBA2_HORVU, E-value = 8e-53

BLAST vs NONCODE:
NONGMAT000220, E-value = 1e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Lupinus angustifoliusOryza sativa80.7759.1583.67294forward
CNT30678405Lupinus angustifoliusSetaria viridis92.8648.4284.62338forward
CNT3071006Lupinus angustifoliusQuercus suber82.1461.982.27299forward
CNT30712809Lupinus angustifoliusGlycine max90.3898.2187.54329forward
CNT30296175Lupinus angustifoliusTriticum aestivum57.6971.9286.19210forward
CNT30220716Lupinus angustifoliusHordeum vulgare17.3127.6395.2463forward
CNT30391993Lupinus angustifoliusTriticum turgidum57.6988.2486.19210forward
CNT30435344Lupinus angustifoliusAegilops tauschii44.7852.4187.12163forward
CNT30445136Lupinus angustifoliusSaccharum spontaneum94.7849.0184.06345forward
CNT30136247Lupinus angustifoliusLolium perenne40.3848.0485.71147forward
CNT301007Lupinus angustifoliusZea mays88.7461.0682.97323forward
CNT30655223Lupinus angustifoliusRosa chinensis29.442.1385.98107forward
CNT30716299Lupinus angustifoliusMalus domestica golden99.7359.885.12363forward
CNT30689748Lupinus angustifoliusTriticum urartu45.0553.7788.41164forward
CNT30721349Lupinus angustifoliusTriticum spelta40.6649.3386.49148forward
CNT3024647Lupinus angustifoliusPopulus trichocarpa92.0364.6783.88335forward
CNT30331462Lupinus angustifoliusDioscorea rotundata50.8235.9982.7185forward
CNT30174517Lupinus angustifoliusVigna angularis25.2745.7786.9692forward
CNT3040082Lupinus angustifoliusMarchantia polymorpha78.0267.6281.69284forward

Expression of CNT30726253

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LRNKTIEVGVCRTLNVKRAPANVINSFII*

Sequence

>CNT30726253
CTGAGAAACAAGACGATTGAGGTTGGTGTATGTAGGACGCTCAATGTCAAGAGAGCGCCTGCAAATGTCATAAATAGCTTCATTATCTAAAAGAATGGAC
ACATCAGTGTGCTCTAGGAGGGAGTGGGTGGAGAGGACACTGTTGTATGGCTCAACAACAGAGGTTGAGACCTGAGGAGAAGGGTAAACAGTGAACCCAA
GCTTTGATTTCTTTCCATAATCAACAGACAAACGCTCCAACAGAAGGGAACCGAGACCAGAACCAGTTCCTCCACCAACAGCATTGAAAACCAAGAAACC
TTGGAGACCAGTGCATTATCAGCAAGCTTCCTAATGCGGTCCAAGCACAGATCAACGATCTCTT