« Back to Cajanus cajan search


Detailed information on CNT30619808


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRR5|TBA3_HORVU, E-value = 4e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Cajanus cajanOryza sativa30.9237.0284.78184forward
CNT30677977Cajanus cajanSetaria viridis29.0832.8384.97173forward
CNT30640127Cajanus cajanNymphaea colorata23.5317.5484.29140forward
CNT30317463Cajanus cajanCorylus avellana11.092489.3966forward
CNT30517675Cajanus cajanJuglans regia30.9230.4685.87184forward
CNT30501067Cajanus cajanCoffea canephora30.5925.1786.26182forward
CNT30727923Cajanus cajanCorchorus capsularis28.0714.187.43167forward
CNT3071006Cajanus cajanQuercus suber21.3426.2985.04127forward
CNT30379324Cajanus cajanManihot esculenta24.0314.885.31143forward
CNT30403515Cajanus cajanBeta vulgaris30.9271.688.59184forward
CNT30710214Cajanus cajanGlycine max50.5999.0188.37301forward
CNT30283673Cajanus cajanTriticum aestivum25.3849.0386.09151forward
CNT30220716Cajanus cajanHordeum vulgare22.8659.6586.76136forward
CNT30383371Cajanus cajanTriticum turgidum23.8747.4986.62142forward
CNT30562914Cajanus cajanActinidia chinensis20.6740.4683.74123forward
CNT30237104Cajanus cajanBrassica oleracea17.9833.0289.72107forward
CNT30555317Cajanus cajanOryza glaberrima14.1229.3794.0584forward
CNT30435344Cajanus cajanAegilops tauschii25.8849.5283.77154forward
CNT3059767Cajanus cajanArabidopsis lyrata23.8720.0383.1142forward
CNT3075316Cajanus cajanBrassica juncea28.0756.2385.03167forward
CNT30265527Cajanus cajanBrassica rapa30.4229.3884.53181forward
CNT30611949Cajanus cajanArabis alpina19.3333.2486.96115forward
CNT30451548Cajanus cajanSaccharum spontaneum30.089.4182.68179forward
CNT30136247Cajanus cajanLolium perenne23.8746.4185.21142forward
CNT30606894Cajanus cajanGossypium raimondii19.8332.3388.14118forward
CNT30648424Cajanus cajanRosa chinensis16.4730.5387.7698forward
CNT30210906Cajanus cajanHelianthus annuus22.0250.1983.21131forward
CNT30129276Cajanus cajanCorymbia citriodora14.2920.3390.5985forward
CNT30716286Cajanus cajanMalus domestica golden29.5813.4886.93176forward
CNT30689747Cajanus cajanTriticum urartu23.8746.2586.62142forward
CNT30721349Cajanus cajanTriticum spelta23.8747.3385.92142forward
CNT30361562Cajanus cajanSorghum bicolor28.0716.8986.23167forward
CNT30597159Cajanus cajanOryza meridionalis31.4325.8385.56187forward
CNT30359416Cajanus cajanLactuca sativa20.6717.286.99123forward
CNT3052700Cajanus cajanAmborella trichopoda13.9526.2787.9583forward
CNT30106559Cajanus cajanOryza longistaminata11.630.885.5169forward
CNT3024757Cajanus cajanPopulus trichocarpa24.0354.7984.62143forward
CNT30331462Cajanus cajanDioscorea rotundata18.6621.685.59111forward
CNT30147962Cajanus cajanBrachypodium distachyon51.0989.6881.58304forward
CNT30104125Cajanus cajanOryza rufipogon53.1123.9281.33316forward
CNT30575645Cajanus cajanOryza barthii30.9221.784.78184forward
CNT30579614Cajanus cajanEchinochloa crusgalli16.8125.3286100forward
CNT30496537Cajanus cajanDigitaria exilis13.4535.487.580forward
CNT30117847Cajanus cajanOryza nivara31.4319.9683.96187forward
CNT30174517Cajanus cajanVigna angularis19.3357.2185.22115forward
CNT30726419Cajanus cajanLupinus angustifolius28.7416.890.64171forward
CNT3040082Cajanus cajanMarchantia polymorpha17.4824.7682.69104forward

Expression of CNT30619808

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MTTGKVVGCIFFATDELLWVEKLAVGSRSTKTARGTCFPAPVSLKKVLKASSPPPTVLSLGICP

>peptide 2 (49 aa)
GVGGTLNVKRAPADVINGFIVQKHSNISVLQERVGGEDTTVKPSFDFLP*

>peptide 3 (43 aa)
WCRWDAQCQESACRCHKWLHCPKAQQHQCAPRESGWRGHYGET*

>peptide 4 (39 aa)
MRSKHRSTISFPTAKATNTASGPTQSIYEIIQSKAIYIM*

Sequence

>CNT30619808
TGGTGTAGGTGGGACGCTCAATGTCAAGAGAGCGCCTGCAGATGTCATAAATGGCTTCATTGTCCAAAAGCACAGCAACATCAGTGTGCTCCAAGAGAGA
GTGGGTGGAGAGGACACTACGGTGAAACCTAGCTTTGACTTTTTGCCATAATCAACAGAGAGACGCTCCAACAGAAGAGAACCAAGTCCAGAACCAGTTC
CTCCTCCAACGGCATTGAAGACCAAGAACCCTTGGAGACCAGTGCAGTTGTCAGCTAGCTTTCTGATGCGGTCCAAGCACAGATCAACGATCTCTTTCCC
AACTGCAAAAGCAACAAACACAGCATCAGGACCCACGCAAAGCATATACGAAATTATACAAAGCAAAGCAATATATATAATGTAATGTGACTTACTGGTG
TAATGACCACGGGCAAAGTTGTTGGCTGCATCTTCTTTGCCACTGATGAGCTGCTCTGGGTGGAAAAGCTGGCGGTAGGTTCAAGATCTACAAAGACAGC
ACGTGGCACGTGCTTTCCAGCACCGGTCTCGCTGAAGAAAGTGTTGAAAGCGTCATCACCGCCTCCAACTGTCTTGTCACTTGGCATTTGTCCAT