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Detailed information on CNT30226752


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8W0|CYB6_ATRBE, E-value = 4e-32

BLAST vs NONCODE:
NONSTUT000261, E-value = 3e-44

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632354Hordeum vulgareVigna unguiculata44.1412.2288.7177forward
CNT30199286Hordeum vulgarePisum sativum37.4121.1690.67150forward
CNT30504292Hordeum vulgareNicotiana attenuata44.149.9288.7177forward
CNT3090412Hordeum vulgareSolanum tuberosum42.647.7488.3171forward
CNT30193370Hordeum vulgareSecale cereale92.5222.9799.73371forward
CNT30286546Hordeum vulgareTriticum aestivum92.5225.0298.11371forward
CNT30395700Hordeum vulgareTriticum turgidum87.7875.8697.44352forward
CNT30543576Hordeum vulgareBrassica napus43.8915.3688.64176forward
CNT30553968Hordeum vulgareOryza glaberrima98.2520.8993.91394forward
CNT30439089Hordeum vulgareAegilops tauschii92.5222.8298.11371forward
CNT30662532Hordeum vulgareTriticum dicoccoides74.0643.1198.32297forward
CNT30230699Hordeum vulgareAnanas comosus54.8637.6786.36220forward
CNT30655369Hordeum vulgareRosa chinensis45.396.390.11182forward
CNT30210627Hordeum vulgareHelianthus annuus44.1415.0390.4177forward
CNT30679636Hordeum vulgareTriticum urartu10035.7496.26401forward
CNT30595910Hordeum vulgareOryza meridionalis18.9525.4293.4276forward
CNT30357898Hordeum vulgareLactuca sativa44.148.8790.96177forward
CNT30421666Hordeum vulgarePapaver somniferum38.1528.8187.58153forward
CNT3025179Hordeum vulgarePopulus trichocarpa25.941392.31104forward
CNT3035458Hordeum vulgareCucumis melo44.149.690.96177forward
CNT30149347Hordeum vulgareBrachypodium distachyon55.6128.1995.52223forward
CNT30499024Hordeum vulgareDigitaria exilis100.526.4894.29403forward
CNT30117031Hordeum vulgareOryza nivara93.7720.4193.62376forward

Expression of CNT30226752

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MICLPYKGPEIPCLRIIGKCININTAVSRGSTKVCKL*

>peptide 2 (34 aa)
MAKSIIQVTHSHNPPFFFRKINFNYLYRIKILRS*

Sequence

>CNT30226752
GCATGGCCAAATCAATAATTCAAGTCACACACTCCCATAATCCGCCTTTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATCGTATAAAAATACTTCG
GAGTTGAAGAGAAGTATCCAAATGACATGTGTTATTTTACAATAACCCATGCTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATT
AGAATTCTCTATGATATGCCTTCCCTATAAAGGACCCGAAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGCAGAGGC
AGTACAAAGGTATGTAAACTATAAAAACGAGTCAAAGTGGATTGGCCCACACTAGCACTTCCGCATAATAACTCCACTAAAGGCGATCCTATTACCGGAA
T