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Detailed information on CNT30117031


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENE4|CYB6_ORYNI, E-value = 1e-148

BLAST vs NONCODE:
NONSTUT000261, E-value = 2e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Oryza nivaraCorylus avellana13.4691.1887.1248forward
CNT30378680Oryza nivaraArabidopsis thaliana13.7920.8789.37254forward
CNT30730483Oryza nivaraCorchorus capsularis5.4322.6892100forward
CNT30632354Oryza nivaraVigna unguiculata38.6549.1788.62712forward
CNT30199319Oryza nivaraPisum sativum28.6626.2489.02528forward
CNT30504292Oryza nivaraNicotiana attenuata34.8535.9989.25642forward
CNT3045035Oryza nivaraPrunus dulcis10.2127.6590.43188forward
CNT3090412Oryza nivaraSolanum tuberosum20.4717.0786.74377forward
CNT30193370Oryza nivaraSecale cereale48.3255.1194.94890forward
CNT30286546Oryza nivaraTriticum aestivum60.0474.5893.131106forward
CNT30226752Oryza nivaraHordeum vulgare20.4193.7793.62376forward
CNT30395700Oryza nivaraTriticum turgidum21.9987.2892.84405forward
CNT30543576Oryza nivaraBrassica napus34.9156.1189.58643forward
CNT30553968Oryza nivaraOryza glaberrima57.3856.0497.821057forward
CNT30439089Oryza nivaraAegilops tauschii48.3254.7494.27890forward
CNT30667320Oryza nivaraTriticum dicoccoides18.7857.8697.11346forward
CNT30139987Oryza nivaraLolium perenne14.8233.9192.31273forward
CNT30230643Oryza nivaraAnanas comosus23.8358.0794.99439forward
CNT30655369Oryza nivaraRosa chinensis34.822.290.02641forward
CNT30210627Oryza nivaraHelianthus annuus34.8554.590.19642forward
CNT30679835Oryza nivaraTriticum urartu38.5555.3492.54710forward
CNT30338816Oryza nivaraEragrostis tef19.5450.792.78360forward
CNT30595910Oryza nivaraOryza meridionalis16.23100100299forward
CNT30357898Oryza nivaraLactuca sativa34.8532.1690.03642forward
CNT30422352Oryza nivaraPapaver somniferum22.6449.8290.17417forward
CNT3057481Oryza nivaraAmborella trichopoda5.1626.9988.4295forward
CNT3035458Oryza nivaraCucumis melo34.8534.8289.1642forward
CNT30149347Oryza nivaraBrachypodium distachyon11.9427.8191.36220forward
CNT30499024Oryza nivaraDigitaria exilis55.6567.3592.881025forward
CNT30556546Oryza nivaraPanicum hallii13.7966.3291.34254forward

Expression of CNT30117031

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MRCLPYKGPEIPCLRIIRKCININTAVSRGSTKVCKL*

>peptide 2 (32 aa)
MRRNIFTSYIICNCLNLKTFLKPIIYFIEIGN*

Sequence

>CNT30117031
TCTGGGTTTTGGTACCTGATCGGCATCAGCGCTGACCTATGTTACTTTTTATTAGCTGAACACTTGGTTTTTTCTTCTTAAAGAAATCACTCGCCTCATT
CTATTTATATAGATTTTATCCGTCTCCTGCTTCTTATCCTTCTCCAAGGAGAGCTACAAGGCGCGAAAGGAGTGCTGTAAAGGGGAAGGGGGTTGGGCGG
CTTATGATGCTTGAGCTTTCTTTCCTCCCTTATGGCGGCGCATTGGGGCACTAGAAATCAAAGAAATCTGCTATGTTATGTGTTATGAGTTTGGGACCCA
GCTGCTGATGTTAGAGCTCTTTTCGAAAGAGCAGCTTATCCACGAAAAAAAATAAGGTTGGCTATCTCAAAATTATAAGAACGAAGGCTTCGGAAAGACT
AGCTTTGGTTGAACCAGTAGCTTACAAAGAGAAAGACTCTGATTCGATGTTCTTCTTAAGAAAAAGAAAGAATGACACGGACTTATCACTAAAAAAAGAA
ACTATCTATACTATAGGTTCCTAGACTCATCAAATAAATAGAAAATCTTCACTGAACAATAGCAAAAGTTCCCACCTAAGTTCGGTATCCCGGCCCCTCC
CGGTAGTACTAGGAGCTGCTGCAAGTAATAGGTCTTCTTAGGATTGGAGATTCAACCTCGTCCTTAAGGAAGAGCCATTGGCCCCTATTTACTCACAGCA
AGTGACCGCCTTCTTGTCGCCTGCCTTTATCTCTCTTCCCNGCTAATTTTGCTCTTAATACAGGATCGTTTAAGTCAGGTTTCTTTGTTACTCCCATAAT
CCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTATTTGTATCACAATAGTTCGGAGTTGAAGAGAAGTATCTAAATGACATGTCTTATT
TTAGAATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATTAGAACTCTCTATGAGATGCCTTCCTTATAAAGGGCC
CGAAATACCTTGCTTACGTATCATTAGAAAGTGCATTAACATAAATACGGCAGTAAGCAGAGGAAGTACAAAGGTATGTAAACTATAAAAACGAGTCAAA
GTGGATTGACCCACACTAGCACTTCCACGTAATAACTCCACTAAAGGTAATCCTATTACCGGAATCGCGTCAGGTACACCTGTCACAATTTTTACTGCCC
AATAACCAATTTGATCCCAAGGTAAAGAATAACCAGTTACACCAAACGATGCAGTCAATACAGCTAAAACCACACCAGTGACCCAAGTTAATTCGCGGGG
TTTTTTAAATCCACCTGTGAGATACACACGAAATACGTGCAGGATCATCATTAGAACCATCATACTTGCTGACCATCGATGAACTGATCGGATTAACCAA
CCAAAGTTGGCCTCGGTCATTATGTATTGAACCGAGGAAAAAGCCTCTGTAACGGTTGGGCGATAGTCAAAAGTCATAGCAAAACCGGTAGCAACTTGTA
CTAGAAAACAAGTAAGTGTAATTCCCCCTAAACAATAAAATATGTTGACATGAGGAGGAACATATTTACTAGTTATATCATCTGCAATTGCCTGAATCTC
AAGACGTTCCTCAAACCAATCATATACTTTATTGAGATAGGTAACTAACCCGAACCCCCCTCCGAGAACCGTATATGAGAATTTCATCTCGTACGGCTCA
AGCAGAAACACACAAATTTTCAACGGATATTAGAAAAAAAAGGTTCAAAACTTAACTTCATCAGCCACTGGATTGGGTCGATTTGCCTTGAAGATATGAA
ATAATAAAAATCCAGTTCTTTGTGATGATAATGCAAAAAATC