Detailed information on CNT30230699


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBQ5|PETD_LOTJA, E-value = 4e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Ananas comosusSesamum indicum17.9850.7292.38105reverse complement
CNT30407229Ananas comosusBeta vulgaris35.7961.1187.56209forward
CNT30632300Ananas comosusVigna unguiculata53.9441.0792.38315forward
CNT30201894Ananas comosusPisum sativum52.2317.1390.16305forward
CNT30504292Ananas comosusNicotiana attenuata55.9918.3392.97327forward
CNT30708642Ananas comosusGlycine max28.9435.4392.31169forward
CNT3090242Ananas comosusSolanum tuberosum55.3127.6390.09323forward
CNT30193370Ananas comosusSecale cereale100.5136.3587.9587forward
CNT30226752Ananas comosusHordeum vulgare37.6754.8686.36220forward
CNT30395700Ananas comosusTriticum turgidum68.3285.9984.96399forward
CNT30556068Ananas comosusOryza glaberrima100.6880.1187.76588forward
CNT30145111Ananas comosusMedicago truncatula32.5342.5191.58190forward
CNT30435040Ananas comosusAegilops tauschii100.5165.2987.73587forward
CNT30662532Ananas comosusTriticum dicoccoides100.5185.286.88587forward
CNT30309624Ananas comosusCamelina sativa52.0572.0488.16304forward
CNT30131654Ananas comosusLolium perenne15.2430.2792.1389forward
CNT30655369Ananas comosusRosa chinensis52.0510.5393.42304forward
CNT30215737Ananas comosusHelianthus annuus46.7589.5189.38273forward
CNT30622073Ananas comosusCajanus cajan53.9478.5594.29315forward
CNT30419844Ananas comosusPapaver somniferum71.0669.5191.08415forward
CNT3025179Ananas comosusPopulus trichocarpa78.085790.13456forward
CNT30104480Ananas comosusOryza rufipogon51.5459.3793.36301forward

Expression of CNT30230699

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MICLLYKGPEIPCLRIIGKCININTAVRRGNTK

>peptide 2 (56 aa)
LKPLKERPITYWVLCGVFEIRERSTIRVIFPKELQMDPPVHQSLTVLEPLNLHYMQ*

Sequence

>CNT30230699
ACTGAAACCATTAAAAGAACGCCCAATAACTTATTGGGTACTGTGCGGAGTATTTGAAATACGGGAAAGAAGTACCATTCGGGTAATATTTCCAAAGGAG
TTGCAAATGGATCCGCCGGTTCACCAATCATTGACGGTTCTAGAACCGCTAAACCTACATTACATGCAATAGTACCTAAAATTACTACTGGAAAAATATA
TAAAAGATCATTGGGCCACGCGGGTTCTCCATAATAATTATGTCCCATCCCTTTAGCCAATTTTGCTCTTAATACAGGATCATTCAAGTCAGGTTTCTTT
GTTACTCCCATAATCCATCCTCTCTTCGGAAAATCCACTTCAACTATTCGTATCAAATAAGGAATACAATACTTCCGAGTTGAAGAGAAGTATCCAAAAA
ACATGTCTTATTTTTTCAATAATCCATATTTGTAGCAATGAAATACTATTGTCCTTCCCGATATATGATCAATTACAAATATCTATGATATGTCTTCTCT
ATAAAGGACCGGAAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGGAGAGGCAATACAAAAG