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Detailed information on CNT30439089


BLAST search results

BLAST vs Swiss-Prot:
sp|A1EA38|CYB6_AGRST, E-value = 7e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Aegilops tauschiiCorylus avellana15.2591.1885.48248forward
CNT30730483Aegilops tauschiiCorchorus capsularis9.2334.0190150forward
CNT30632354Aegilops tauschiiVigna unguiculata39.5444.4187.87643forward
CNT30199319Aegilops tauschiiPisum sativum28.1722.7689.08458forward
CNT30504292Aegilops tauschiiNicotiana attenuata41.0237.3988.76667forward
CNT30193370Aegilops tauschiiSecale cereale96.9997.6598.481577forward
CNT30286546Aegilops tauschiiTriticum aestivum74.1181.2599.091205forward
CNT30226752Aegilops tauschiiHordeum vulgare22.8292.5298.11371forward
CNT30543576Aegilops tauschiiBrassica napus39.3655.8589.53640forward
CNT30554238Aegilops tauschiiOryza glaberrima64.7698.3293.921053forward
CNT30655369Aegilops tauschiiRosa chinensis41.2723.2388.67671forward
CNT30210627Aegilops tauschiiHelianthus annuus42.9359.2589.83698forward
CNT30679835Aegilops tauschiiTriticum urartu47.2359.8697.27768forward
CNT30338816Aegilops tauschiiEragrostis tef8.8620.2895.83144forward
CNT30622073Aegilops tauschiiCajanus cajan24.0597.5189.77391forward
CNT30595910Aegilops tauschiiOryza meridionalis18.3910094.31299forward
CNT30357898Aegilops tauschiiLactuca sativa67.8455.2686.221103forward
CNT30422352Aegilops tauschiiPapaver somniferum27.9854.3689.89455forward
CNT30574487Aegilops tauschiiVitis vinifera8.2421.7286.57134forward
CNT3057481Aegilops tauschiiAmborella trichopoda8.0637.2283.97131forward
CNT3035458Aegilops tauschiiCucumis melo40.9636.1289.34666forward
CNT30575540Aegilops tauschiiOryza barthii5.2320.6890.5985reverse complement
CNT30499024Aegilops tauschiiDigitaria exilis51.655.1293.92839forward
CNT30117031Aegilops tauschiiOryza nivara54.7448.3294.27890forward
CNT30556546Aegilops tauschiiPanicum hallii23.5510090.08383forward

Expression of CNT30439089

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGRNIFTSYIICNCLNLKTFLKPIIYFTHIPEIPKQKNSAVELP*

>peptide 2 (37 aa)
MICLPYKGTEIPCLRIIGKCININTAVSRGSTKVCKL*

>peptide 3 (58 aa)
PNQRATTVPIKKTVVATGRRNGFWNLLTFSRKGTVNKPVGTETIKRTPNNLLGTVRSI*

>peptide 4 (45 aa)
MIDRNIANKAIAIPIKGVVPQPGATFPYSEFSRVSVNYLHQFVLA*

Sequence

>CNT30439089
TACCTAACCAAAGAGCTACTACAGTACCGATTAAAAAAACGGTCGTAGCTACTGGGCGGCGAAATGGTTTTTGGAATTTATTGACATTCTCTAGAAAAGG
TACTGTCAATAAGCCTGTTGGCACAGAAACCATTAAAAGAACGCCCAATAACTTATTGGGTACCGTACGGAGTATTTGAAACACGGGAAAGAAGTACCAC
TCGGGTAATATTTCCAGAGGAGTTGCAAACGGATCTGCCGGTTCACCAATCATTGATGGCTCGAGAACCGCTAAACCTACATTACATGCAATAGTACCTA
GAATTACTACTGGAAAAATATATAAAAGATCGTTGGGCCATGCGGGTTCCCCGTAATAATTATGTCCCATCCCTTTAGCTAATTTAGCTCTTAATACAGT
ATCATTTAAGTCTGGTTTCTTTGTTACTCCCATAATCCGCCTTTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTT
GAAGAGAAGTATCCAAATGACATGTGTTATTTTACAATAACCCATGCTTGTAGCAATGAAATACCAAAACCTACCCGATATGATATATGATAATTATAAT
TCTCTATGATATGCCTTCCCTATAAAGGAACCGAAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGCAGAGGCAGTAC
AAAGGTATGTAAACTATAAAAACGAGTCAAAGTGGATTGGCCCACACTAGCACTTCCGCGTAATAACTCCACTAAAGGCGATCCTATTACCGGAATGGCG
TCAGGTACACCTGTCACAATTTTGACTGCCCAATAGCCAATTTGATCCCAAGGCAAAGAATAACCAGTTACACCAAATGATGCAATCAAAACAGCCAAAA
CCACACCTGTGACCCAAGTTAATTCACGGGGTTTTTTAAATCCCCCTGTGAGATACACACGAAATACATGCAGGATCATCATTAAAACCATCATACTTGC
TGACCATCGATGAACTGATCGGATTAACCAACCAAAGTTGGCCTCGGTCATTATGTATTGAACCGAGGAAAAAGCCTTTGTAACGGTTGGTCGGTAGTAA
AAAGTCATAGCAAAACCGGTAGCGACTTGTACTAGAAAACAAGTAAGTGTAATTCCCCCTAAACAATAAAATATGTTGACATGGGGAGGAACATATTTAC
GAGTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTCCTCAAACCAATCATATACTTTACTCATATTCCAGAGATACCGAAACAAAAAAATTCCGCG
GTCGAACTACCATAATATCTAGAAATGTGGATCTTAAACTAGAAAGGCTTTTTTGGATGGAAAAACTCTAACTTCCTAGTTTTAGTTAGTAGAAACCTAA
TTGGTTAAAATTCCGTCCAGTAAAACGGAAGAATTATAAATTTCTAAAATGATAGATAGGAATATAGCGAATAAAGCCATTGCGATCCCCATAAAAGGAG
TAGTCCCCCAACCCGGGGCGACTTTCCCATATTCCGAATTCTCAAGGGTTTCAGTAAACTACCTGCACCAGTTCGTTTTGGCCTAGGTTTAGAACTATCT
TCAACGGTTTGTGTAGCCATAAATTC