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Detailed information on CNT30210627


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXS9|CYB6_HELAN, E-value = 2e-154

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Helianthus annuusCorylus avellana22.2496.3287.4262forward
CNT30730483Helianthus annuusCorchorus capsularis36.9398.6486.21435forward
CNT30401838Helianthus annuusBeta vulgaris13.541.4185.53159forward
CNT30632354Helianthus annuusVigna unguiculata54.5844.4190.67643forward
CNT30199319Helianthus annuusPisum sativum38.8822.7689.3458forward
CNT30504292Helianthus annuusNicotiana attenuata97.9664.6990.731154forward
CNT3090412Helianthus annuusSolanum tuberosum41.0921.9289.05484forward
CNT30193370Helianthus annuusSecale cereale59.2543.2290.54698forward
CNT30286546Helianthus annuusTriticum aestivum54.6743.4389.91644forward
CNT30226752Helianthus annuusHordeum vulgare15.0344.1490.4177forward
CNT30398533Helianthus annuusTriticum turgidum16.3862.0692.23193forward
CNT30543576Helianthus annuusBrassica napus68.5970.5189.6808forward
CNT30554238Helianthus annuusOryza glaberrima58.7464.6190.17692forward
CNT30439089Helianthus annuusAegilops tauschii59.2542.9389.83698forward
CNT30667320Helianthus annuusTriticum dicoccoides34.0467.0689.53401forward
CNT30230643Helianthus annuusAnanas comosus29.9746.6990.37353forward
CNT30655369Helianthus annuusRosa chinensis9137.1289.181072forward
CNT30679835Helianthus annuusTriticum urartu37.6934.6190.54444forward
CNT30338816Helianthus annuusEragrostis tef12.2220.2894.44144forward
CNT30595910Helianthus annuusOryza meridionalis25.3810091.64299forward
CNT30357898Helianthus annuusLactuca sativa99.6658.8295.491174forward
CNT30422352Helianthus annuusPapaver somniferum62.5688.0588.33737forward
CNT30574487Helianthus annuusVitis vinifera37.9572.4588.14447forward
CNT3057481Helianthus annuusAmborella trichopoda10.8736.3687.5128forward
CNT3035458Helianthus annuusCucumis melo59.1737.892.4697forward
CNT30499024Helianthus annuusDigitaria exilis54.5842.2588.8643forward
CNT30117031Helianthus annuusOryza nivara54.534.8590.19642forward
CNT30556546Helianthus annuusPanicum hallii25.3878.0785.62299forward

Expression of CNT30210627

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MLYLLYIYKGPEIPCLRIIGKCININTAVRSGNTKVCKL*

>peptide 2 (31 aa)
CQIKNIAEFKGNIQIHVLLFSIIHTCSNKIL*

>peptide 3 (45 aa)
MRRNIFTSYIIRNRLNLKTLFKPIIYFTHIPEIQKQRNSTVELPK*

>peptide 4 (31 aa)
MMNSKYLCYIFSISIKDQKSLVYVSLGSALT*

Sequence

>CNT30210627
ATGCCAAATCAAAAATATTGCGGAGTTCAAGGGAAATATCCAAATACATGTCTTATTATTTTCAATAATCCATACTTGTAGCAATAAAATACTATAGTTC
CTACCCCAAGTGATAAATGATGAATTCAAAATATCTATGCTATATCTTCTCTATATCTATAAAGGACCAGAAATCCCTTGTTTACGTATCATTGGGAAGT
GCATTAACATAAATACGGCAGTAAGAAGCGGCAATACAAAAGTGTGTAAACTATAAAAACGAGTCAAAGTGGATTGTCCCACACTAGCACTTCCGCGCAA
TAATTCTACCAAAGGTGATCCTATTACAGGAATAGCGTCAGGTACACCTGTTACAATTTTCACTGCCCAATAACCAATTTGGTCCCAGGGTAAAGAATAA
CCAGTTACACCAAATGATGCAGTCAATACAGCCAGAACCACACCTGTAACCCAAGTTAATTCGCGCGGTTTTTTAAATCCACCGGTGAGATATACACGAA
ATACATGTAGGATCATCATTAGGACCATCATACTTGCCGACCATCGATGAACTGATCGGATTAACCAACCAAAATTAGCTTCAGTCATTATGTATTGAAC
AGAAGCAAAAGCATCAGTAACGGTCAAACGATAGTAAAAGGTCATAGCAAATCCTGTAGCCACTTGTACTAAAAAACAAGTAAGCGTAATTCCCCCTAGA
CAATAAAATATGTTTACATGAGGAGGAACATATTTACTAGTTATATCATCCGCAATCGCCTGAATCTCAAGACGCTCTTCAAACCAATCATATACTTTAC
TCATATTCCAGAAATACAGAAACAAAGAAATTCCACGGTCGAACTACCAAAATAGAATGAGCTAGAAATCCGAGCTCTAAAGGATTCATTTTTTATTGAA
AAGCAAGGACTTGGGGGTTCTTATAGATCTAATTCATTGAAATTCCATCCAATAAAACAGAAGAATTATAAATCTCTAAAATAATAGATAGAAATACCGC
AAATAGAGCCATTTCGACGCCCATCAAAGGGGTCGTTCCCCACCCCAGAGCTACTTCACCATATTCAGAATTCAAGGGTTTTAATAAATTCCCTACAGTA
TTTCGTCTTGGACCAGATTTAGAACCGTTTTCGACAGTTTGTGTAGCCATAAATCCTATTGTATTCATTGAAATCTGT