« Back to Triticum urartu search


Detailed information on CNT30679636


BLAST search results

BLAST vs Swiss-Prot:
sp|A1EA38|CYB6_AGRST, E-value = 2e-106

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226752Triticum urartuHordeum vulgare35.7410096.26401forward
CNT30553968Triticum urartuOryza glaberrima60.6136.0692.5680forward
CNT30149347Triticum urartuBrachypodium distachyon19.8828.1991.48223forward
CNT30499024Triticum urartuDigitaria exilis66.1348.7592.59742forward

Expression of CNT30679636

Peptides detected in this lncRNA

>peptide 1 (30 aa)
AETPLVVNSNVADPILYLHGQINNSSHTLP*

>peptide 2 (43 aa)
MWQIQFFICMAKSIIQVTHSHNPPFFFRKINFNYLYCIKILWS*

>peptide 3 (37 aa)
MICLSYKGPKIPCLRIIGKCININTAVSKGSTKVCKL*

>peptide 4 (57 aa)
MNIANKATVIPIKGVVPQPGATFPYSEFKGFSKLPAPVRFVLGLEISSTVCVAIDSI*

Sequence

>CNT30679636
GCGGAGACACCTTTGGTTGTGAATTCTAATGTGGCAGATCCAATTCTTTATCTGCATGGCCAAATCAATAATTCAAGTCACACACTCCCATAATCCGCCT
TTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTTGAAGAGAAGTATCCAAATGACATGTGTTATTTTACAATAACC
CATGCTTGTAGCAATGAAATACCAAAACCTACCCGATATGATAATTATAATTCTCTATGATATGCCTTTCCTATAAAGGACCCAAAATACCTTGCTTACG
TATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGCAAAGGCAGTACAAAGGTATGTAAACTATAAAAACGAGTCAAAGTGGATTGGCCCACACTA
GCACTTCCGCGTAATAACTCCACTAAAGGCGATCCTATTACCGGAATGGCGTCAAGTACACCTATCACAATTTTGACTGCCCAATAGCCAATTTGATCCC
AAGGCAAAGAATAACCAGTTACACCAAATGATGCAGTCAAAACAGCCAAAACCACACCTGTGACCCAAGTTAATTCGCGGGGTTTTTTAAATCCCCCTGT
GAGATACACACGAAATACATGCAGGATCATCATTAAAACCATCATACTTGCTGACCATCGATGAACTGATCGGATTAACCAACCAAAGTTGGCCTCGGTC
ATTATGTATTGAACCGAGGAAAAAGCCTATGTAGTAAAACCGGTAGCGACTTGTACTAGAAAACAAGTGTAATTCCCCCTAAACAATAAAATATGTTGAC
ACGGGGAGGAACATATTTACTAGTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTACTCAAACCAATCATATACTTTACTCATATTCCACAGATAC
CGAAACAAAAAAATCCGTGGTCGAACTACCATAATATCTAGAAATGAATATAGCGAATAAAGCCACTGTGATCCCCATAAAAGGAGTAGTCCCCCAACCC
GGGGCGACTTTCCCATATTCCGAATTCAAGGGTTTCAGTAAACTACCTGCACCAGTTCGTTTTGTCCTAGGTTTAGAAATATCTTCAACGGTTTGTGTAG
CCATAGATTCTATTTAATCATT