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Detailed information on CNT30553968


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENE4|CYB6_ORYNI, E-value = 6e-151

BLAST vs NONCODE:
NONSTUT000261, E-value = 6e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Oryza glaberrimaCorylus avellana13.1591.1886.29248forward
CNT30378680Oryza glaberrimaArabidopsis thaliana13.6321.1289.88257forward
CNT30632354Oryza glaberrimaVigna unguiculata38.650.2888.6728forward
CNT30199319Oryza glaberrimaPisum sativum28.7426.9488.93542forward
CNT3045035Oryza glaberrimaPrunus dulcis9.9727.6590.96188forward
CNT3090242Oryza glaberrimaSolanum tuberosum18.7230.286.12353forward
CNT30286546Oryza glaberrimaTriticum aestivum59.4475.5993.581121forward
CNT30226752Oryza glaberrimaHordeum vulgare20.8998.2593.91394forward
CNT30139987Oryza glaberrimaLolium perenne20.6348.3290.75389forward
CNT30230643Oryza glaberrimaAnanas comosus34.1585.1990.22644forward
CNT30679636Oryza glaberrimaTriticum urartu36.0660.6192.5680forward
CNT30338816Oryza glaberrimaEragrostis tef22.9660.9994433forward
CNT30595910Oryza glaberrimaOryza meridionalis15.8510098.33299forward
CNT30369893Oryza glaberrimaOryza glumipatula15.7566.4497.64297forward
CNT3057481Oryza glaberrimaAmborella trichopoda6.7936.3685.94128forward
CNT30108418Oryza glaberrimaOryza longistaminata15.7564.9997.64297forward
CNT30149347Oryza glaberrimaBrachypodium distachyon11.8228.1991.48223forward
CNT30104459Oryza glaberrimaOryza rufipogon19.14100.5697.23361forward
CNT30575540Oryza glaberrimaOryza barthii15.7572.2698.32297reverse complement
CNT30499024Oryza glaberrimaDigitaria exilis61.5676.2891.91161forward
CNT30117031Oryza glaberrimaOryza nivara56.0457.3897.821057forward

Expression of CNT30553968

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTRQNREKKSCFFGQTKLEGRNFLFLFFIKNYLNFFQSGCEV*

>peptide 2 (40 aa)
MRISSRTAQTETHKFSTDIRKKVQNFISHWVGSICLEDMK*

>peptide 3 (37 aa)
MRCLPYKGPEIPCLRIIRKCININTAVSRGSTKVCKL*

>peptide 4 (32 aa)
MRRNIFTSYIICNCLNLKTFLKPIIYFIEIGN*

>peptide 5 (31 aa)
MLIIRGLLIFLFPILDFFFLCVMQIYSCFTR*

Sequence

>CNT30553968
CAATAATTCAAGTCGCACACTCCCATAATCCGCCTTCTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTATTTGTATCACAATAGTTCGGAGTTGA
AGAGAAGTATCTAAATGACATGTCTTATTTTAGAATAACCCATGTTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGAGAATTAGAACTC
TCTATGAGATGCCTTCCTTATAAAGGGCCCGAAATACCTTGCTTACGTATCATTAGAAAGTGCATTAACATAAATACGGCAGTAAGCAGAGGAAGTACAA
AGGTATGTAAACTATAAAAACGAGTCAAAGTGGATTGACCCACACTAGCACTTCCACGTAATAACTCCACTAAAGGTGATCCTATTACCGGAATCGCGTC
AGGCACACCTGTCACAATTTTGACTGCCCAATAACCAATTTGATCCCAAGGTAAAGAATAACCAGTTACACCAAACGATGCAGTTAATACAGCTAAAACC
ACACCAGTGACCCAAGTTAATTCGCGGGGTTTTTTAAACCCACCTGTGAGATACACACGAAATACGTGCAGGATCATCATTAGAACCATCATACTTGCTG
ACCATCGATGAACTGATCGGATTAACCAACCAAAGTTGGCCTCGGTCATTATGTATTGAACCGAGGAAAAAGCCTCTGTAACGGTTGGGCGATAGTAAAA
AGTCATAGCAAAACCGGTAGCAACTTGTACTAGAAAACAAGTAAGTGTAATTCCCCCTAAACAATAAAATATGTTGACATGAGGAGGAACATATTTACTA
GTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTCCTCAAACCAATCATATACTTTATTGAGATAGGTAACTAACCCGAACCCCCCTCCGAGAACCG
TATATGAGAATTTCATCTCGTACGGCTCAAACAGAAACACACAAATTTTCAACGGATATTAGAAAAAAGGTTCAAAACTTCATCAGCCACTGGGTTGGGT
CGATTTGCCTTGAAGATATGAAATAAGAAAAATCCAGAATTTCTTCTTTGTGATGATAATGCCAAAAAATCTCAAGTTGGCTCGTCTATCTTTCTTTCCC
AAATGTTGATCATTAGAGGCCTCTTGATTTTTCTCTTCCCTATTTTGGATTTCTTTTTTTTGTGCGTAATGCAGATTTACTCTTGTTTTACTAGATAAAT
AAATAAAGCAAAAATTGGAGTAGTTTTCTGGTAGAAATTATCTTGTTGCGATCCTATGAATCAGTTCAATTAAAACCTTAGATTCATACTAGAGCCACGA
TGATTGAGTCTCAAGCTAAACAAAAGGCAAGGGTTCTTCGAATAAGAACCGCTTGATGATCATTTATTGAATCGGTGTAATGACTCGACAAAATCGAGAG
AAAAAAAGTTGTTTTTTTGGGCAAACAAAATTGGAAGGAAGAAATTTTCTTTTTTTATTTTTTATTAAGAACTACTTGAATTTTTTTCAGTCTGGTTGCG
AGGTCTGAATAGTTAATATGAATCATAGTTTCATTTTTTTTTCTTGATCCACTCTATCTATTTCGTGTTCCAGATACTAGAATAAATAATATCCGACGAA
TTAGAATCATCTTGATAGAGATAACAGGTGCTTTCTATGTATTATCAATAGGAGCAAATTCTAACAAGTCACACACTCATATTCCAGAGATACCGAAACC
AAAAAATTCCACGGTCGAACTACCAGAATGTCTAGAAATGTAGAGCTTAAAGTAGAAAGGCTCTTTTGGATGGAAAAACTATGACTTCGTAGTTTTCGTT
AGTAGAAACCTAATTCATTAAAATTCCGTCCAGTAAAACGGAAGAATTATAAATTTCTAAAATAATAGATAGGAATACCGCGAATA