CANTATAdb - search

Detailed information on CNT30199286

BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8W0|CYB6_ATRBE, E-value = 4e-55

BLAST vs NONCODE:
NONSTUT000261, E-value = 5e-75

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30226752	Pisum sativum	Hordeum vulgare	21.16	37.41	90.67	150	forward
CNT30395700	Pisum sativum	Triticum turgidum	21.16	32.33	92	150	forward
CNT30145111	Pisum sativum	Medicago truncatula	54.02	85.68	88.51	383	forward
CNT30421666	Pisum sativum	Papaver somniferum	74.33	99.25	83.68	527	forward
CNT3057481	Pisum sativum	Amborella trichopoda	18.05	36.36	84.38	128	forward

Expression of CNT30199286

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MIHILYKGPEIPCLRIIGKCINMNTAVRRGNTKVCKL*

Sequence

>CNT30199286
GTTGCAAACGGATTCGCGGGTTCCCCAATCATTGATGGTTCGAGAACCGCTAAGCCCACGTTATAGGCAATAGTCCCCAGAATCACTACTGGAAAAATAT
ATAAAAGATCGTTAGGCCATGCGGGTACACCATAATAATTATGACCCATCCCTTTGGCCAATTTAGCTCTTAATACAAGATCAGTCAAGTCAGGTTTTTT
TGTTACTCCCATAATCCATTCTTTTTTCCGAGAGTTCCCTTCAACTATTCGTGTATGTCAAATAAAGAATCCAATTGATTTTGTTAAGTTGAAGGGAAAT
ATCCAAATACATGTCTTATTCAAAAAAAATAATGCATATTTGTAGCAATGAAATACTATGACTCCTCCCCAAAATGATTGATTACAAATATCTATGATTC
ATATTCTCTATAAAGGACCAGAAATTCCTTGCTTACGTATCATTGGAAAGTGCATTAACATGAATACGGCAGTAAGAAGAGGTAATACAAAAGTATGTAA
ACTATAAAAACGAGTCAAGGTAGATTGTCCCACACTAGCGCTGCCGCGCAATAACTCTACCACCGAGGATCCTATTACAGGAATAGCGTCGGGTACACCT
GTTACAATTTTGACTGCCCAATAACCGATTTGGTCCCAAGGTAAAGAATAACCAGTTACACCGAAGGATGCAGTCAATACACCCAAAACTACACCTGTAA
CCCAAGTCA