CANTATAdb - search

Detailed information on CNT30357898

BLAST search results

BLAST vs Swiss-Prot:
sp|Q68RX7|CYB6_PANGI, E-value = 1e-142

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30315736	Lactuca sativa	Corylus avellana	13.13	96.32	88.93	262	forward
CNT30618210	Lactuca sativa	Sesamum indicum	3.91	37.68	94.87	78	reverse complement
CNT3019629	Lactuca sativa	Citrullus lanatus	15.88	77.13	89.59	317	forward
CNT30730483	Lactuca sativa	Corchorus capsularis	21.64	97.96	87.73	432	forward
CNT30401838	Lactuca sativa	Beta vulgaris	16.63	86.46	84.64	332	forward
CNT30632354	Lactuca sativa	Vigna unguiculata	32.21	44.41	91.6	643	forward
CNT30199319	Lactuca sativa	Pisum sativum	22.95	22.76	90.17	458	forward
CNT30504292	Lactuca sativa	Nicotiana attenuata	61.32	68.61	90.85	1224	forward
CNT30708642	Lactuca sativa	Glycine max	8.47	35.43	86.39	169	forward
CNT3090412	Lactuca sativa	Solanum tuberosum	24.25	21.92	88.22	484	forward
CNT30193370	Lactuca sativa	Secale cereale	55.01	67.99	86.79	1098	forward
CNT30286546	Lactuca sativa	Triticum aestivum	52.56	70.73	86.08	1049	forward
CNT30226752	Lactuca sativa	Hordeum vulgare	8.87	44.14	90.96	177	forward
CNT30398533	Lactuca sativa	Triticum turgidum	9.67	62.06	91.71	193	forward
CNT30543576	Lactuca sativa	Brassica napus	43.39	75.57	89.84	866	forward
CNT30554238	Lactuca sativa	Oryza glaberrima	34.67	64.61	90.03	692	forward
CNT30147444	Lactuca sativa	Medicago truncatula	9.17	54.14	87.43	183	reverse complement
CNT30439089	Lactuca sativa	Aegilops tauschii	55.26	67.84	86.22	1103	forward
CNT30667320	Lactuca sativa	Triticum dicoccoides	20.09	67.06	89.78	401	forward
CNT30309624	Lactuca sativa	Camelina sativa	9.02	42.65	85.56	180	forward
CNT30230643	Lactuca sativa	Ananas comosus	17.69	46.69	90.93	353	forward
CNT30655369	Lactuca sativa	Rosa chinensis	73.3	50.66	88.17	1463	forward
CNT30210627	Lactuca sativa	Helianthus annuus	58.82	99.66	95.49	1174	forward
CNT30679835	Lactuca sativa	Triticum urartu	22.49	35	89.76	449	forward
CNT30622073	Lactuca sativa	Cajanus cajan	10.72	53.37	89.25	214	forward
CNT30595910	Lactuca sativa	Oryza meridionalis	14.98	100	90.64	299	forward
CNT30482165	Lactuca sativa	Chara braunii	4.51	21.03	83.33	90	forward
CNT30422352	Lactuca sativa	Papaver somniferum	42.33	100.96	88.17	845	forward
CNT30574487	Lactuca sativa	Vitis vinifera	30.66	99.19	89.38	612	forward
CNT3053422	Lactuca sativa	Amborella trichopoda	32.11	26.29	82.68	641	reverse complement
CNT3025179	Lactuca sativa	Populus trichocarpa	18.64	46.5	86.56	372	forward
CNT3035458	Lactuca sativa	Cucumis melo	45.04	48.75	90.1	899	forward
CNT30104480	Lactuca sativa	Oryza rufipogon	9.47	37.28	83.6	189	forward
CNT30499024	Lactuca sativa	Digitaria exilis	32.21	42.25	88.8	643	forward
CNT30117031	Lactuca sativa	Oryza nivara	32.16	34.85	90.03	642	forward
CNT30556546	Lactuca sativa	Panicum hallii	14.98	78.07	85.28	299	forward
CNT30336835	Lactuca sativa	Cynara cardunculus	7.06	22.63	97.16	141	forward

Expression of CNT30357898

Peptides detected in this lncRNA

>peptide 1 (58 aa)
DGYAGSPIIDGSRAAKPTLHAIVPRITTRKIYKRLXKIIGPCGLPVIIMTHTFSQFRS*

>peptide 2 (43 aa)
METTTLVAIFIYGLLVSFTGYTLYTAFGQPSQQLRDPFEEHGD*

>peptide 3 (45 aa)
MRRNIFTSYIICNRLNLETFFKPIIDFTHIPEIQKQRNSTVELPK*

>peptide 4 (29 aa)
MMNSKDRCYLFSIKDQKYLVYVSLGSALT*

>peptide 5 (37 aa)
MLSLFYKGPEIPCLRIIGKCININTAVRSGNTKVCKL*

Sequence

>CNT30357898
CAGATGGATATGCCGGTTCACCTATCATTGATGGTTCTAGAGCCGCTAAGCCTACGTTACATGCAATAGTACCTAGAATTACTACCAGAAAAATATATAA
AAGATTANAAAAGATCATTGGGCCATGCGGGCTCCCCGTAATAATTATGACCCATACCTTTAGCCAATTTCGCTCTTAATACAGGATCATTCAAGTCAGG
TTTTTTTGTTACTCCCATAATCCATTTTCTCTTCGGAAAATTCCCTTCAACTATTTATGTCAAATAAAAAATATTGCGGAGTTCAAGGGAAATATCCAAA
TACATGTCTTATTATTTTCAATAATCCATACTTGTAGCAATAAAATACTATTGTTCCTACCCCAAGTGATAAATGATGAATTCAAAAGATCGATGCTATC
TCTTTTCTATAAAGGACCAGAAATACCTTGTTTACGTATCATTGGGAAGTGCATTAACATAAATACGGCAGTAAGAAGCGGCAATACAAAAGTGTGTAAA
CTATAAAAACGAGTCAAAGTGGATTGTCCCACACTAGCACTTCCGCGCAATAATTCTACCAAAGGTGATCCTATTACAGGAATAGCTTCAGGTACACCTG
TTACAATTTTCACTGCCCAATAACCAATTTGGTCCCGAGGTAAGGAATAACCAGTTACACCAAAAGATGCAGTCAATACACCCAGAACCACACCTGTAAC
CCAAGTTAATTCGCGAGGTTTTTTAAATCCACCGGTGAGATATACACGAAATACATGTAGGATCATCATTAGGACCATCATACTTGCCGACCATCGATGA
ACTGATCGGATTAACCAACCAAAATTAGCTTCAGTCATTATGTATTGAACAGAAGCAAAAGCATCAGTAACGGTCGGACGATAGTAAAAGGTCATAGCAA
ATCCTGTAGCCACTTGGACTAAAAAACAAGTAAGCGTAATTCCCCCTAGACAATAAAATATGTTTACATGAGGAGGAACATATTTACTAGTTATATCATC
TGCAATCGCCTGAATCTCGAGACGTTCTTCAAACCAATCATAGACTTTACTCATATTCCAGAAATACAGAAACAAAGAAATTCCACGGTCGAACTACCAA
AATAGAATGAGCTAGAGATCCGAGCTCTAAATGATTCATTTTTTATTGAAAAGCTAGGACTTGTGGGTTCTTATAGATATAATTCATTGAAATTCCATCC
AATAAAATGGAAGAATTATAAATTTCCAAAATAATAGATCGAAATACCGCAAATAGAGCCATTGCGACACCCATCAAAGGGGTCGTTCCCCACCCATGAA
CTACTTTACCATTTTCCGAATTCAATGGTTTTAATAAATCCCCTACAGTAGTTCGTCTTGGACCAGATCTAGCACCGTTCTCAACAGTTTGTGTAGCCAT
AAATCTTATTGTATTCATTGAAATCTGTTGACTTTGTATACCATCTCATTGTAAATAAACGATCTTATCATAGATCCATTGTGGTCTTGAAGTCATATAA
TAATGGAAACAACAACCCTAGTTGCTATCTTTATATATGGTTTACTTGTAAGTTTTACTGGGTACACCTTATATACCGCTTTTGGGCAACCTTCTCAACA
ACTAAGAGATCCATTCGAGGAACACGGGGACTAATTGAAGTAATGAGCCTCCCAATATTGGGAGGCTCATTACTTCAATTGTGATAATGAAAAATCATTT
CATTTTTTTTATTTTTTAGTTGGAACTTTTGGAGGTTCTCTAAAAAAGATAGCGAAAAAAATTATCCCTAGAGTCGAGACTAAGAGGAATGTATAAACCA
ATGCTTCCATAGATTCGATCGTGGTTTACAATTATAGCTTCCATACCTGTTTATTTTTTGTTTCTTTTTTGGGGGATCATATCCCGAATAAAGAAAGAGC
AAGAGTAACAAAAAAATGACGATGCAAATCAAGATTGGTACCCTATATCAAAAAAATAAAATAGATTCGAAAGACACCAAAGAAATGTTATATCAG