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Detailed information on CNT3090412


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06GM9|PETD_PIPCE, E-value = 1e-60

BLAST vs NONCODE:
NONSTUT000261, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Solanum tuberosumCorylus avellana6.5252.9486.11144forward
CNT30618210Solanum tuberosumSesamum indicum4.7650.7293.33105reverse complement
CNT30708642Solanum tuberosumGlycine max11.1951.7891.9247forward
CNT30286546Solanum tuberosumTriticum aestivum13.5920.2389.33300forward
CNT30226752Solanum tuberosumHordeum vulgare7.7442.6488.3171forward
CNT30395700Solanum tuberosumTriticum turgidum6.6631.6891.16147forward
CNT30543576Solanum tuberosumBrassica napus13.1325.3191.72290forward
CNT30554238Solanum tuberosumOryza glaberrima13.1327.0890290forward
CNT30145111Solanum tuberosumMedicago truncatula8.6142.5188.42190forward
CNT30667320Solanum tuberosumTriticum dicoccoides13.1348.4990290forward
CNT30210627Solanum tuberosumHelianthus annuus21.9241.0989.05484forward
CNT30679835Solanum tuberosumTriticum urartu16.0327.5985.88354forward
CNT30338816Solanum tuberosumEragrostis tef10.5132.6886.21232forward
CNT30595910Solanum tuberosumOryza meridionalis11.3283.6185.6250forward
CNT30357898Solanum tuberosumLactuca sativa21.9224.2588.22484forward
CNT30422352Solanum tuberosumPapaver somniferum13.1334.6591.72290forward
CNT3057481Solanum tuberosumAmborella trichopoda5.7536.0885.04127forward
CNT30104480Solanum tuberosumOryza rufipogon17.375.3586.39382forward
CNT30499024Solanum tuberosumDigitaria exilis16.0323.2685.03354forward
CNT30117031Solanum tuberosumOryza nivara17.0720.4786.74377forward
CNT30556546Solanum tuberosumPanicum hallii11.1964.4985.43247forward

Expression of CNT3090412

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIKCFLGRLRPSNWYLSPKCLEIHIQGLLVTNIV*

>peptide 2 (34 aa)
MWQAYIYTDQSIVQVTHSHNPFSLHKIPFNPPVY*

>peptide 3 (41 aa)
MNGCLLMYNMIRIIERFSLSEPAYPLYRTYTAIGTKRHIRL*

>peptide 4 (44 aa)
MVQYKKNLTEFFFMELQLSITKQRIPFLQVNTQDPSRLTNQIMI*

>peptide 5 (49 aa)
MDPPVHQSLMVLKWLSLHYMQLYLELLLEKYIKDHWAMRARQNNYDPYS*

>peptide 6 (61 aa)
MVNTARTTPVTKVNSRGFLNPSVRYTRNTCRIHKIPFPLRIELTFPLFRVENLTETLLWIF*

>peptide 7 (30 aa)
MAKPTLHAIVPRITTGKIYKRSLGHAGSPK*

Sequence

>CNT3090412
CCCTCAGGTACTTAAACCATTAAAAGAACCCCCAATAATTTATTGGGCACTGTACGAAGTATTTGAAATACAGGATTGAAATACCATTAAGGTAAGATTT
CCAAAGGGGTTGCAAATGGATCCGCCGGTTCACCAATCATTGATGGTTCTAAAATGGCTAAGCCTACATTACATGCAATTGTACCTAGAATTACTACTGG
AAAAATATATAAAAGATCATTGGGCCATGCGGGCTCGCCAAAATAATTATGACCCATACTCTTAGCCAATTTAGCTCTTAATACAGGATCATTCAAGTCA
GGTTTTTTTGTTATTGGGATAGGTGAATTCTTATAGATCCATCCCCCGAGGGAACTGGACATGATAATTTTTAATCATCCAGCTCGAGCAAGAATAAAAA
GAACCAAACGAATCCATATATCCATATAAAATATCTATATGGTACCGGTATTTACACATACACATATATGATATAGGAATGGTTCAATATAAGAAAAATT
TGACTGAATTCTTTTTTATGGAGTTGCAACTATCCATTACAAAACAAAGAATTCCGTTCTTACAAGTAAATACTCAAGACCCAAGTAGGCTTACAAATCA
GATCATGATATGATCAAGTGCTTTCTGGGTCGTCTCAGACCTTCTAATTGGTATTTATCTCCAAAATGCTTGGAGATACACATACAAGGTTTGCTTGTTA
CTAATATAGTCTAGCCTCTCTTCTTCTTTAGATCCCTTGTTTCACTCTGATAGTATTATTGATCGTGTCAATGTAGAGGAAATGAATACATTTACATACT
ATTAAATCTTATAAGTGAACTAGATAAAAGGGAATCTTGATTCCCTTTTATCTAGTTCACTTATACTAGATGAATGGTTGCCTACTCATGTATAACATGA
TTCGGATCATAGAAAGATTCTCTTTAAGCGAACCAGCCTATCCTCTGTATAGAACTTACACGGCGATTGGAACAAAGAGACACATTCGGTTGTGAATTCC
CATGTGGCAGGCATATATCTACACAGACCAATCAATAGTTCAAGTCACACACTCCCATAATCCATTTTCTCTTCACAAAATTCCCTTCAATCCCCCCGTT
TATTGACATGAATGGTTAAAGGGAAATGTCCAAATCCATGTCTTATTATTTTCAATAATCCATACTTGTAGCAATGAAATACTATATATTCCTACACCAA
GTAATAAACGGTTGATTACAAATAGTTAGGATATATTTTGACTTTCTCTATCTATAAAGGCCCAGAAATACCTTTTTTACGTATCATTGGAAAGTGCATT
AACATAAATACGGCAGTAAGAAGCGGCAATACAAAAGTGTGTAAACTATAAAAATGAGTCAAAGTAGATTGTCCCACACTAGCACTTCTGCGCAATAATT
CGACCAAAGGTAATCCTATTACAGAAATAGCGTCAGGGACACCTGTTACTATTTTCACTGCCCAATAGCCAATTTGGTCCCAAGGTAAGGAATAACCAGT
TACGCCAAAAGATATGGTTAATACAGCAAGAACCACACCTGTAACCAAAGTCAATTCACGAGGTTTTTTAAATCCGTCGGTGAGATACACACGAAATACA
TGCAGAATTCACAAAATTCCGTTTCCATTGAGAATTGAATTGACCTTTCCCTTATTTCGAGTGGAGAATCTAACAGAGACATTACTGTGGATATTCTGAC
CAAAAAATGTGACATTCCATGCCCTTGGAGAGTGCTTTATCGTGCTAGGTCACTGACATATCTTTTTTTGTCTTTATTTGACCCCAAGAATGGATTGGAT
CATCATTAGGACCATCATACTTGCCGACCATCGATGAACGGATCAGATTAACCAACCAAAGTTGGCTTCAGTCATTATGTATTGAACAGAAGCAAAAGCC
TCAGTAACGGTCGAACAATAGTAAAAAGTAATAGCAAACCCAGTAGCTACTTGTACTAAAAAACAAGTAAGCGTAATTCCCCCTAAACAATAAAATATAT
TGACGTGGGGAGGAACATATTTACTAGTTATATCATCCGCAATTGCTTGAATCTCGAGACGTTCTTCGAACCAATCATACACTTTAATGTGATAGGCGGA
ACTCCCCTTCTGAGAATCGTATATGAGACTTTCATCTCGTACAACTCAAGCAAAAACACCCAAATACTAGTTGCAACGGATATGGAATAGAAAGTTTGAA
ATTTATTA