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Detailed information on CNT30662532


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XX7|PETD_AMBTC, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407229Triticum dicoccoidesBeta vulgaris41.5183.6384.62286forward
CNT30632300Triticum dicoccoidesVigna unguiculata55.8850.288.05385forward
CNT30201894Triticum dicoccoidesPisum sativum55.1521.3485.79380forward
CNT3090242Triticum dicoccoidesSolanum tuberosum58.0634.2284.75400forward
CNT30193370Triticum dicoccoidesSecale cereale10042.6698.11689forward
CNT30286546Triticum dicoccoidesTriticum aestivum96.3744.7798.34664forward
CNT30226752Triticum dicoccoidesHordeum vulgare43.1174.0698.32297forward
CNT30395700Triticum dicoccoidesTriticum turgidum59.3688.1598.04409forward
CNT30556068Triticum dicoccoidesOryza glaberrima97.8291.8394.21674forward
CNT30145111Triticum dicoccoidesMedicago truncatula27.2942.0689.36188forward
CNT30435040Triticum dicoccoidesAegilops tauschii10076.6498.4689forward
CNT30309624Triticum dicoccoidesCamelina sativa57.0493.1385.5393forward
CNT30131654Triticum dicoccoidesLolium perenne26.2761.5696.69181forward
CNT30230699Triticum dicoccoidesAnanas comosus85.2100.5186.88587forward
CNT30215737Triticum dicoccoidesHelianthus annuus33.9676.7290.6234forward
CNT30679835Triticum dicoccoidesTriticum urartu59.2231.895.83408forward
CNT30622073Triticum dicoccoidesCajanus cajan56.7597.5188.49391forward
CNT30419844Triticum dicoccoidesPapaver somniferum57.186687.31394forward
CNT3025179Triticum dicoccoidesPopulus trichocarpa45.4339.1290.73313forward
CNT30149347Triticum dicoccoidesBrachypodium distachyon31.3527.3195.37216forward
CNT30104480Triticum dicoccoidesOryza rufipogon44.2760.1694.43305forward

Expression of CNT30662532

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MICLPYKGPEIPCLRIIGKCININTAVSKGSTKVCKL*

Sequence

>CNT30662532
AAAAAACGGTCGTAGCTACTGGGCGGCGAAATGGATTTTGAAATTTATTGACATTCTCTAGAAAAGGTACTGTCAATAAGCCTGTTGGCACAGAAACCAT
TAAGAGAACGCCCAATAACTTATTGAGTACCGTACGGAGTATTTGAAACACGGGAAAGAAGTACCACTCGGGTAATATTTCCAGAGGAGTTGCAAACGGA
TCTGCCGGTTCACCAATCATTGATGGCTCCAGAACCGCTAAACCTACATTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATTGT
TGGACCATGCGGGTTCCCCGTAATAATTATGTCCCATCCCTTTAGCTAATTTAGCTCTAAATACAGGATCATTTAAGTCTGGTTTCTTTGTTACTCCCAT
AATCCGCCTTTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTTGAAGAGAAGTATCCAAATGACATGTGTTATTTT
ACAATAACCCATGCTTGTAGCAATGAAATACCACAACCTACCCGATATGATATATGATAATTATAATTCTCTATGATATGCCTTCCCTATAAAGGACCCG
AAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGCAAAGGCAGTACAAAGGTATGTAAACTATAAAAA