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Detailed information on CNT30504292


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3C1M5|CYB6_NICSY, E-value = 9e-153

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Nicotiana attenuataCorylus avellana13.7990.4489.02246forward
CNT30618210Nicotiana attenuataSesamum indicum5.8950.7297.14105reverse complement
CNT30730483Nicotiana attenuataCorchorus capsularis11.2145.3593200forward
CNT30407229Nicotiana attenuataBeta vulgaris19.45101.4688.47347forward
CNT30632354Nicotiana attenuataVigna unguiculata36.0444.4189.74643forward
CNT30199319Nicotiana attenuataPisum sativum25.5622.6690.13456forward
CNT30708642Nicotiana attenuataGlycine max8.9133.3393.71159forward
CNT3090242Nicotiana attenuataSolanum tuberosum33.7451.596.51602forward
CNT30193370Nicotiana attenuataSecale cereale38.8542.9189.47693forward
CNT30286546Nicotiana attenuataTriticum aestivum36.143.4389.44644forward
CNT30226752Nicotiana attenuataHordeum vulgare9.9244.1488.7177forward
CNT30398533Nicotiana attenuataTriticum turgidum10.5460.4590.43188forward
CNT3085551Nicotiana attenuataVigna radiata7.9662.2889.44142forward
CNT30543576Nicotiana attenuataBrassica napus44.7969.7288.61799forward
CNT30554238Nicotiana attenuataOryza glaberrima38.7964.6189.31692forward
CNT30145111Nicotiana attenuataMedicago truncatula10.6542.5191.58190forward
CNT30439089Nicotiana attenuataAegilops tauschii38.8542.6288.74693forward
CNT30667320Nicotiana attenuataTriticum dicoccoides21.9765.5590.31392forward
CNT30309624Nicotiana attenuataCamelina sativa21.4790.7691.38383forward
CNT30131654Nicotiana attenuataLolium perenne14.5288.185.33259forward
CNT30230699Nicotiana attenuataAnanas comosus18.3355.9992.97327forward
CNT30655369Nicotiana attenuataRosa chinensis68.6742.4288.491225forward
CNT30210627Nicotiana attenuataHelianthus annuus64.6997.9690.731154forward
CNT30679835Nicotiana attenuataTriticum urartu25.6735.788.65458forward
CNT30338816Nicotiana attenuataEragrostis tef8.1820.5692.47146forward
CNT30622073Nicotiana attenuataCajanus cajan22.3799.593.98399forward
CNT30595910Nicotiana attenuataOryza meridionalis16.7610088.29299forward
CNT30357898Nicotiana attenuataLactuca sativa68.6161.3290.851224forward
CNT30422352Nicotiana attenuataPapaver somniferum47.65101.5587.88850forward
CNT30574487Nicotiana attenuataVitis vinifera29.0483.9588.61518forward
CNT3057481Nicotiana attenuataAmborella trichopoda7.4637.7886.47133forward
CNT3025179Nicotiana attenuataPopulus trichocarpa18.0540.2595.34322forward
CNT3035458Nicotiana attenuataCucumis melo39.5738.2992.07706forward
CNT30104480Nicotiana attenuataOryza rufipogon16.2657.288.28290forward
CNT30499024Nicotiana attenuataDigitaria exilis36.0442.2587.56643forward
CNT30117031Nicotiana attenuataOryza nivara35.9934.8589.25642forward
CNT30556546Nicotiana attenuataPanicum hallii15.7573.3786.12281forward

Expression of CNT30504292

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLHQCPTKGRLRYQSKRQSSLLDGEMDFGIY*

>peptide 2 (31 aa)
MIDYKYLGSIFLFSIKAQKYLVYVSLESALT*

>peptide 3 (73 aa)
RPKVRDLSIGNVAPMPNQRAAAVPIKKTVVATGRRNGFWNLLTFSKKGTVNNPTGTETIKRTPNNLLGTVRSI*

Sequence

>CNT30504292
AAAGACCTAAAGTTAGGGATTTATCAATAGGTAATGTTGCACCAATGCCCAACCAAAGGGCGGCTGCGGTACCAATCAAAAAGACAGTCGTCGCTACTGG
ACGGCGAAATGGATTTTGGAATTTATTAACATTCTCTAAAAAAGGTACTGTTAATAATCCCACAGGTACTGAAACCATTAAAAGAACCCCCAATAATTTA
TTGGGCACTGTACGAAGTATTTGAAATACAGGAAAGAAATACCATTCAGGTAATATTTCCAAAGGGGTTGCAAATGGATCTGCCGGTTCACCAATCATTG
ATGGTTCTAAAACGGCTAAGCCTACATTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCATTGGGCCATGCGGGCTCTCCATA
ATAATTATGACCCATACCTTTAGCCAATTTAGCTCTTAATACAGGATCATTCAAGTCAGGTTTTTTTGTTACTCCCATAATCCATTTTCTCTTCACAAAA
TTCCCTTCAATCCCCCCGTTTAGTTGACATGAATAGTTAAAGGGAAATATCCAAATCCATGTCTTATTATTTTCAATAATCCATACTTGTAGCAATGAAA
TACTATATATTCCTCCACCAAGTGATAAATGATTGATTACAAATATTTAGGATCTATTTTTCTTTTCTCTATAAAGGCCCAGAAATACCTTGTTTACGTA
TCATTGGAAAGTGCATTAACATAAATACGGCAGTAAGAAGCGGCAATACAAAAGTGTGTAAACTATAAAAACGGGTCAAAGTAGATTGTCCCACACTAGC
GCTTCCGCGCAATAATTCGACCAAGGGTGATCCTATTACAGGAATAGCGTCAGGGACACCTGTTACTATTTTCACTGCCCAATAACCAACTTGGTCCCAA
GGTAAGGAATAACCAGTTACGCCAAAAGATGCGGTTAATACAGCCAGAACCACACCTGTAACCCAAGTCAATTCGCGAGGTTTTTTAAATCCGCCGGTGA
GATACACACGAAATACATGCAGGATCATCATTAGGACCATCATACTTGCCGACCATCGATGAACTGATCGGATTAACCAACCAAAGTTGGCTTCAGTCAT
TATGTATTGAACAGAAGCAAAAGCCTCAGTAACGGTCGGACGATAATAAAAAGTCATAGCAAACCCAGTAGCTACTTGTACTAAAAAACAAGTAAGCGTA
ATTCCCCCTAAACAATAAAATATATTGACGTGGGGAGGAACGTATTTACTAGTTATATCATCCGCAATTGCTTGAATCTCGAGACGTTCTTCGAACCAAT
CATATACTTTACTCATACTCCGGAAATACAGAAACAAAGAAATTCCACGATCGAACTACCAAAAGAAAATAGAATGGACTAGAAATCGGAGCTCTAAATG
ATTCATTTTGGACTCAAAAGCAAGAACTTTGCGGTTCTTATAGATCTAATTCATTGAAATTCCATCCAATAAAACGGAAGAATTATAAATCTCCAAAATA
ATAGATAGAAATACCGCAAATAAGGCCATTGCGACACCCATCAAAGGAGTAGTTCCCCACCCAGGAGCTACTTTGCCATATTCCGAATTCAATGGTTTTA
ATAAATCTCCTACCGCAGTTCGTCTTGGACCAGATCTAGAACTGTTTTCAACAGCTTGTTTAGCCATAAATCCTATTGTATTCATTGAGATCAGTTGACT
TTGTATACCATTCCGTTGTAAATAAACGATCCTATCATAGATCCATTGGGGTCTTGAAATTTTATAAATATGATAAGAATGGAA