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Detailed information on CNT30286546


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XX7|PETD_AMBTC, E-value = 4e-85

BLAST vs NONCODE:
NONSTUT000261, E-value = 1e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Triticum aestivumCorylus avellana15.9186.7685.59236forward
CNT30378680Triticum aestivumArabidopsis thaliana17.1320.8789.76254forward
CNT30618210Triticum aestivumSesamum indicum7.0850.7293.33105reverse complement
CNT30407229Triticum aestivumBeta vulgaris18.3479.5385.66272forward
CNT30632354Triticum aestivumVigna unguiculata44.3745.4488.6658forward
CNT30199319Triticum aestivumPisum sativum35.6726.2988.66529forward
CNT30504292Triticum aestivumNicotiana attenuata43.4336.189.44644forward
CNT30708642Triticum aestivumGlycine max10.9934.1791.41163forward
CNT3090412Triticum aestivumSolanum tuberosum20.2313.5989.33300forward
CNT30193370Triticum aestivumSecale cereale81.2574.6198.761205forward
CNT30226752Triticum aestivumHordeum vulgare25.0292.5298.11371forward
CNT30395700Triticum aestivumTriticum turgidum31.2910098.92464forward
CNT30543576Triticum aestivumBrassica napus43.3656.1189.27643forward
CNT30553968Triticum aestivumOryza glaberrima75.5959.4493.581121forward
CNT30145111Triticum aestivumMedicago truncatula12.6842.0691.49188forward
CNT30439089Triticum aestivumAegilops tauschii81.2574.1199.091205forward
CNT30662532Triticum aestivumTriticum dicoccoides44.7796.3798.34664forward
CNT30309624Triticum aestivumCamelina sativa24.7586.9786.65367forward
CNT30139987Triticum aestivumLolium perenne25.0246.0994.07371forward
CNT30230643Triticum aestivumAnanas comosus38.375.1389.26568forward
CNT30655369Triticum aestivumRosa chinensis43.2922.2389.1642forward
CNT30210627Triticum aestivumHelianthus annuus43.4354.6789.91644forward
CNT30679835Triticum aestivumTriticum urartu51.8559.9497.14769forward
CNT30338816Triticum aestivumEragrostis tef28.6659.8691.29425forward
CNT30622073Triticum aestivumCajanus cajan25.5694.5189.97379forward
CNT30595910Triticum aestivumOryza meridionalis20.23100.3393.67300forward
CNT30357898Triticum aestivumLactuca sativa70.7352.5686.081049forward
CNT30422352Triticum aestivumPapaver somniferum27.3848.5189.66406forward
CNT3057481Triticum aestivumAmborella trichopoda8.8337.2284.73131forward
CNT3025179Triticum aestivumPopulus trichocarpa21.1139.1292.33313forward
CNT3035458Triticum aestivumCucumis melo43.4334.9289.6644forward
CNT30104480Triticum aestivumOryza rufipogon20.3659.5795.7302forward
CNT30499024Triticum aestivumDigitaria exilis76.4774.5191.361134forward
CNT30117031Triticum aestivumOryza nivara74.5860.0493.131106forward
CNT30556546Triticum aestivumPanicum hallii17.1366.3292.52254forward

Expression of CNT30286546

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MGRNIFTSYIICNCLNLKTFLKPIIYFIEIGN*

>peptide 2 (29 aa)
MKISSRTAQAETQKFSTNIRKKVQNFISH*

>peptide 3 (39 aa)
RNGFWNLLTFSRKGTVNKPVGIETIKRTPNNLLGTVRSI*

>peptide 4 (37 aa)
MICLPYKGPEIPCLRIIGKCININTAVSRGSTKVCKL*

Sequence

>CNT30286546
GCGAAATGGATTTTGGAATTTATTGACATTCTCTAGAAAAGGTACTGTCAATAAGCCTGTTGGCATAGAAACCATTAAAAGAACGCCCAATAACTTATTG
GGTACCGTACGGAGTATTTGAAACACGGGAAAGAAGTACCACTCGGGTAATATTTCCAGAGGAGTTGCAAACGGATCTGCCGGTTCACCAATCATTGATG
GCTCGAGAACCGCTAAACCTACATTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCGTTGGGCCATGCGGGTTCCCCGTAATA
ATTATGTCCCATCCCTTTAGCTAATTTAGCTCTTAATACAGGATCATTTAAGTCTGGTTTCTTTGTTACTCCCATAATCCGCCTTTTTTCTTTCATAAAA
TTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTTGAAGAGAAGTATCCAAATGACATGTGTTATTTTACAATAACCCATGCTTGTAGCAATG
AAATACCAAAACCTACCCGATATGATATATGATAATTATAATTCTCTATGATATGCCTTCCCTATAAAGGACCCGAAATACCTTGCTTACGTATCATTGG
AAAGTGCATTAACATAAATACGGCAGTAAGCAGAGGCAGTACAAAGGTATGTAAACTATAAAAACGAGTCAAAGTGGATTGGCCCACACTAGCACTTCCG
CGTAATAACTCCACTAAAGGCGATCCTATTACCGGAATGGCGTCAGGTACACCTGTCACTATTTTGACTGCCCAATAGCCAATTTGATCCCAAGGCAAAG
AATAACCAGTTACACCAAATGATGCAGTCAAAACAGCCAAAACCACACCTGTGACCCAAGTTAATTCACGGGTTTTTTTTAAATCCCCCTGTGAGATACA
CACGAAATACATGCAGGATCATCATTAAAACCATCATACTTGCTGACCATCGATGAACTGATCGGATTAACCAACCAAAGTTGGCCTCGGTCATTATGTA
TTGAACCGAGGAAAAAGCCTCTGTAACGGTTGGTCGGTAGTAAAAAGTCATAGCAAAACCGGTAGCGACTTGTACTAGAAAACAAGTAAGTGTAATTCCC
CCTAAACAATAAAATATGTTGACATGGGGAGGAACATATTTACTAGTTATATCATCTGCAATTGCCTGAATCTCAAGACGTTCCTCAAACCAATCATATA
CTTTATTGAGATAGGTAACTAACCCGAGTCCCCCTCTAAGAGCCGTATATGAAAATTTCATCTCGTACGGCTCAAGCAGAAACACAAAAATTTTCAACGA
ATATTAGAAAAAAGGTTCAAAACTTCATCAGCCACTGAATTGGGTCGATTTGCCTTGAAGATATCAAATAAGAAAAATCCGGAATATCTTCTTTGTGATG
ATAATGCCAAAAAATCTCAAGTTGGCGCGTCTTTCTTTCTTCCCTTCCCTTATGTTGGTCATTAGAGGCTTCTTGACTTTTCT