Detailed information on CNT30421666


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Papaver somniferumSesamum indicum19.7750.7291.43105reverse complement
CNT30199286Papaver somniferumPisum sativum99.2574.3383.68527forward
CNT30708642Papaver somniferumGlycine max29.5732.9193.63157forward
CNT30226752Papaver somniferumHordeum vulgare28.8138.1587.58153forward
CNT30395700Papaver somniferumTriticum turgidum28.8132.9788.89153forward
CNT30655374Papaver somniferumRosa chinensis32.7729.8591.38174forward
CNT30336835Papaver somniferumCynara cardunculus27.1223.1184.03144forward

Expression of CNT30421666

Peptides detected in this lncRNA

>peptide 1 (31 aa)
VRQSLTVLEPLNLRYMQWYLELLLEKYIKDR*

>peptide 2 (40 aa)
MKYYSSSPNRYIIDYKYLGSVFSIKDQKCLAYISLGNALT*

>peptide 3 (31 aa)
MRVLHNNYDPSLLPIWLLIQDHTSQFFLLLP*

>peptide 4 (37 aa)
SPIIDGSRTAKPTLHAMVPRITTGKIYKRSLDHAGSP*

Sequence

>CNT30421666
GTTCGCCAATCATTGACGGTTCTAGAACCGCTAAACCTACGTTACATGCAATGGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCGTTAGACCA
TGCGGGTTCTCCATAATAATTATGACCCATCCCTTTTGCCAATTTGGCTCTTAATACAGGATCATACAAGTCAGTTTTTTTTGTTACTCCCATAATCCAT
TTTCTCTTCGTAGAATCCACTTCAACTATTCATATCAAATAAATAATCAATATTGTAGAGTTGAAGGTAAATATCCAAAAAAATGTCTTATTTTTCAATA
ATCCATATTTCTAGCAATGAAATACTACTCCTCCTCCCCAAACAGATATATAATTGATTACAAATATCTAGGATCTGTCTTCTCTATAAAGGACCAGAAA
TGCCTTGCTTACATATCATTGGGAAATGCATTAACATAAATACGACAGTAAGCACATGTAATACAAAAGTGTGTAAATTATAAAAACGCGTTAAAGTAGA
TTGGCCCACACTAGCACTTCCTCGTAATAAC