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Detailed information on CNT3035458


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A365|CYB6_COFAR, E-value = 2e-151

BLAST vs NONCODE:
NONSTUT000261, E-value = 2e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535418Cucumis meloEucalyptus grandis14.780.981.18271forward
CNT30315736Cucumis meloCorylus avellana14.2196.3290.08262forward
CNT30730483Cucumis meloCorchorus capsularis11.0146.0392.12203forward
CNT30401838Cucumis meloBeta vulgaris11.8256.7785.32218forward
CNT30632354Cucumis meloVigna unguiculata35.244.8291.68649forward
CNT30199319Cucumis meloPisum sativum24.8422.7692.14458forward
CNT30504292Cucumis meloNicotiana attenuata38.2939.5792.07706forward
CNT3090242Cucumis meloSolanum tuberosum19.2530.3789.3355forward
CNT30193370Cucumis meloSecale cereale35.4140.4390.05653forward
CNT30286546Cucumis meloTriticum aestivum34.9243.4389.6644forward
CNT30226752Cucumis meloHordeum vulgare9.644.1490.96177forward
CNT30395700Cucumis meloTriticum turgidum8.1332.3393.33150forward
CNT30543576Cucumis meloBrassica napus55.2688.9289.41019forward
CNT30554238Cucumis meloOryza glaberrima35.3660.8889.26652forward
CNT30439089Cucumis meloAegilops tauschii35.4140.1689.59653forward
CNT30667320Cucumis meloTriticum dicoccoides19.0958.8690.06352forward
CNT30605060Cucumis meloGossypium raimondii3.926.7787.572reverse complement
CNT30230643Cucumis meloAnanas comosus19.1446.6990.08353forward
CNT30655369Cucumis meloRosa chinensis94.6960.4686.881746forward
CNT30210627Cucumis meloHelianthus annuus37.859.1792.4697forward
CNT30679835Cucumis meloTriticum urartu24.8435.788.65458forward
CNT30338816Cucumis meloEragrostis tef7.8120.2891.67144forward
CNT30595910Cucumis meloOryza meridionalis16.2110088.63299forward
CNT30357898Cucumis meloLactuca sativa48.7545.0490.1899forward
CNT30422352Cucumis meloPapaver somniferum23.6452.0991.97436forward
CNT30574487Cucumis meloVitis vinifera12.5837.688.36232forward
CNT3057481Cucumis meloAmborella trichopoda4.8325.2894.3889forward
CNT30151654Cucumis meloBrachypodium distachyon3.5824.5486.3666forward
CNT30499024Cucumis meloDigitaria exilis34.8742.2588.96643forward
CNT30117031Cucumis meloOryza nivara34.8234.8589.1642forward
CNT30556546Cucumis meloPanicum hallii14.3268.9386.74264forward
CNT30336835Cucumis meloCynara cardunculus16.1147.6785.19297forward

Expression of CNT3035458

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHDMVKSDHGKDSLQANQPTLCMELSRWLE*

>peptide 2 (34 aa)
MEKILFKRTSLPSVWSFRGGWNKDTFCCESQCGR*

>peptide 3 (62 aa)
MRRNVFTSYIICNRLNFKTFFEPIIHFTHIPEIQKKINSTIELPKNSGLKSRNLHTLDFPFY*

>peptide 4 (37 aa)
MISILYKGPEMPCLRIIGKCININTAVRRGNTKVCKL*

>peptide 5 (66 aa)
MFKCFLGRLNPCDGALAPKNIDTFYIQRIYLLLIESSLCSSLDPLFHSDSIINRVNAEEMNAFSYY*

Sequence

>CNT3035458
AAAAAAATTGATATCTTATCCAAGCATAAAATAAATGAGTGATTCAATGTAAGAAGAAATTTACCAGATTCTGTTTTCAAGAGTCACAATTATCCATTGC
AAGGAATTTAGTTCTTACAGATAAATGCTCAATACCCAAGTAGGCTTACAAAGTTGATAATGTTCAAGTGCTTTCTGGGTCGTCTCAACCCTTGCGATGG
GGCTTTAGCCCCCAAAAATATTGATACTTTTTACATCCAAAGGATTTACTTGTTACTAATAGAGTCTAGCCTATGTTCTTCTTTAGATCCCTTGTTTCAC
TCCGATAGTATTATAAATCGAGTCAATGCAGAGGAAATGAATGCATTTTCATACTATTAAGTAAGTGAAATAGATAAAACATAATCTGTATTATGGCATA
TATATCACCTATTCTAATGGATCTTACGGAGCCTGGTCATGCACGACATGGTCAAGTCTGATCATGGAAAAGATTCTCTTCAAGCGAACCAGCCTACCCT
CTGTATGGAGCTTTCGCGGTGGTTGGAATAAAGACACATTTTGTTGTGAATCCCAATGTGGCAGATAAAAAGACATATATCTACACGGTCCAATCAATAG
TTCAAGTCACACACTCCCATAATCCATTTTCTCTTCGAAGAATTCCCTTCAACTATTATTGAAAAATAACGAATAAAATTTCGTGGAGTTGAAGGGAAAT
ATCCAAATACATGTCTTATTTTTCAATAATCCATATTTGCAGCAATGAAATACTCTTCTTCCCCCCTGAGTAATCATAAATAACTAATTACAAATCTATG
ATTTCTATTCTCTATAAAGGACCAGAAATGCCTTGCTTACGTATCATTGGGAAGTGCATTAACATAAATACGGCAGTAAGAAGAGGTAATACAAAAGTGT
GTAAACTATAAAAACGAGTCAAGGTAGATTGTCCCACACTAGCACTTCCGCGTAATAACTCTACCAAAGGCGACCCTATTACTGGAATAGCTTCCGGTAC
ACCTGTTACAATTTTGACTGCCCAATAACCAATTTGGTCCCGAGGTAAGGAATAACCAGTTACACCAAAGGATGCGGTCAATACAGCCAGAACCACACCT
GTAACCCAAGTCAATTCACGAGGTTTTTTAAATCCACCAGTAAGATACACGCGAAATACGTGCAGGATCATCATTAAGACCATCATACTTGCCGACCATC
TATGAACTGATCGGATTAACCAACCAAAATTTGCTTCCGTCATTATATATTGAACAGAAGCAAAAGCCTCAGTAACGGTCGGACGGTAGTAAAAAGTCAT
AGCAAACCCCGTAGCTACTTGTACTAAAAAACAAGTAAGCGTAATTCCTCCTAGACAATAAAATATGTTGACATGAGGAGGAACGTATTTACTAGTTATA
TCATCTGCAATCGCCTGAATTTCAAGACGTTCTTCGAACCAATCATACACTTTACTCATATTCCGGAAATACAGAAAAAAATAAATTCCACGATCGAACT
ACCAAAAAATAGTGGGCTAAAAAGCAGAAACCTACATACTTTAGACTTTCCTTTTTATTGAAAAGTTATTTAGGGGTTCTTGTGAATCGAATCTAATTGC
TTGAAATTCCGTCCAGTAAAATGGAAGAATTATAAATCTCCAAAATAATACATAGGAATATCGCAAATAAACCCATCGCGACACCCATTAAAGGTGTAGT
TCCCCACCCAGGAGCCACTTTACCATATTCCGAATTCAATGGTTTCAATAAATCCCCTACAACAGTTCGTCTTGGCCCAGATCTAGAACTATCGTCAACG
GTTTGTGTAGCCATAAATAATCCTATATTTTTTTATTCAGTGAG