« Back to Vigna unguiculata search


Detailed information on CNT30632354


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ5|CYB6_SOYBN, E-value = 5e-152

BLAST vs NONCODE:
NONSTUT000261, E-value = 2e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Vigna unguiculataCorylus avellana18.7299.6387.45271forward
CNT30199319Vigna unguiculataPisum sativum37.5727.0490.26544forward
CNT30504292Vigna unguiculataNicotiana attenuata44.4136.0489.74643forward
CNT30193370Vigna unguiculataSecale cereale44.4139.8188.49643forward
CNT30286546Vigna unguiculataTriticum aestivum45.4444.3788.6658forward
CNT30226752Vigna unguiculataHordeum vulgare12.2244.1488.7177forward
CNT30395700Vigna unguiculataTriticum turgidum10.1531.6891.16147forward
CNT30543576Vigna unguiculataBrassica napus46.6258.990.07675forward
CNT30553968Vigna unguiculataOryza glaberrima50.2838.688.46728forward
CNT30439089Vigna unguiculataAegilops tauschii44.4139.5487.87643forward
CNT30667320Vigna unguiculataTriticum dicoccoides23.957.8688.44346forward
CNT30230643Vigna unguiculataAnanas comosus29.2856.0890.33424forward
CNT30655369Vigna unguiculataRosa chinensis43.8521.9991.02635forward
CNT30210627Vigna unguiculataHelianthus annuus44.4154.5890.67643forward
CNT30679835Vigna unguiculataTriticum urartu30.6634.6188.06444forward
CNT30338816Vigna unguiculataEragrostis tef10.0820.5693.84146forward
CNT30595910Vigna unguiculataOryza meridionalis20.6510088.29299forward
CNT30357898Vigna unguiculataLactuca sativa44.4132.2191.6643forward
CNT30422352Vigna unguiculataPapaver somniferum28.849.8288.97417forward
CNT3057481Vigna unguiculataAmborella trichopoda8.9136.6586.82129forward
CNT3035458Vigna unguiculataCucumis melo44.8235.291.68649forward
CNT30499024Vigna unguiculataDigitaria exilis45.3743.1787.82657forward
CNT30117031Vigna unguiculataOryza nivara45.335.6188.87656forward
CNT30556546Vigna unguiculataPanicum hallii17.5466.3285.04254forward
CNT30336835Vigna unguiculataCynara cardunculus10.0823.4383.56146forward

Expression of CNT30632354

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MIHIHYKGPEMPCLRIIEKCININTAVRRGNTKVCKL*

>peptide 2 (70 aa)
MRRNIFTGYIIGNRLNFKTFFEPIINFIEIGNPKEPPQRTVYANFISYGSNKNTQILIVTKTDICNRKFET

>peptide 3 (35 aa)
MQNKIESDHRKDSLQVKPAYPLCKSLSWWLEKRHI*

Sequence

>CNT30632354
GCTCAATACCCGAGTAGACTTTTCAAGTTGATAATGCTTTCTGGGTGATCTCAAACTTTGCAATTGTTATCCTGTCAAAAAAAAAATCTTGATACTTTTT
ATGTACAAAGAATTTACTTGTTACTAATATAACCTAACTCGCGTTGTTCTTTAGATCTACTTTGTTCACTCCAATAGTATCAGAAATCAAATCAATGCAT
AGGAAATGAATGCGTTGTCATACTATATAGAATTCAGACTATACCACACCACTTCTTTTACTGGATCTTACGGAGCCTGTTGATGCAGAATAAAATCGAG
TCTGATCATAGAAAAGATTCTCTTCAAGTAAAACCAGCCTACCCTCTCTGTAAGAGCCTTTCTTGGTGGTTGGAAAAAAGACACATTTAATTTTAAATTC
TAATGTGGCAGATAAGAGAAAGTCATATATCTGCGCGGCCAAATAAATAGTTCAAGTCACACACTCCCATAATCCATTTTTTGTTTGGAGAGTTCCCTTC
AACTATTTATGTATGTAAAAAAAAAAAACAAAAATTCAATTTTTGTTAAGTTGAAGAAAAATATCTAAATACATGTTTTATTTTTTTTTATAATCCATAA
TTGTAGCAATGAAATAAAATCCTCCCCAAAATAAAAAATGATAGTGATTACAAATATCTATGATCCATATTCACTATAAAGGACCAGAAATGCCTTGCTT
ACGTATCATTGAAAAGTGCATTAACATAAATACAGCAGTAAGAAGAGGTAATACAAAAGTATGCAAACTATAAAAACGAGTTAAGGTAGATTGGCCCACA
CTGGAACTTCCGCGTAATAATTCTACCAAAGACGATCCTATTACAGGAATAGCTTCGGGTACGCCTGTTACTATTTTTACTGCCCAATAACCAATTTGAT
CCCAAGGTAAGGAATAACCAGTTACACCAAAAGATGCAGTTAATACAGCCAAAACTACACCCGTAACCCAAGTTAATTCGCGAGGTTTTTTAAAACCACC
TGTAAGATACACACGAAATACGTGTAGAATCATCATTAAGACCATCATACTTGCCGACCATCGATGAACTGATCGGATTAACCAACCAAAATTAGCTTCA
GTCATTATATATTGAACAGAAGCAAAAGCTTCAGTAACGGTTGGGCGATAATAAAAAGTCATAGCAAATCCTGTTGCTACTTGGACTAAAAAACAAGTAA
GTGTAATTCCCCCTAAACAATAAAATATGTTCACATGAGGCGGAACATATTTACTGGTTATATCATCGGCAATCGCCTGAATTTCAAGACGTTCTTCGAA
CCAATCATAAACTTTATTGAGATAGGTAACCCAAAGGAACCCCCCCAGAGAACCGTATATGCGAATTTCATCTCGTACGGCTCAAACAAAAATACCCAAA
TATTGATTGTAACAAAAACAGATATCTGTAATAGAAAGTTTGAAACTG