CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30521855 | Setaria italica | IX:984703-987091 (-) | coding (0.274) | - | 93 | 1.9 | 2 | Expressed preferentially in leaf | |
CNT30521854 | Setaria italica | IX:56513611-56516278 (+) | coding (0.48) | - | 79 | 0.37 | 3 | Conserved counterparts: CNT30448019 Expressed preferentially in leaf |
|
CNT30521853 | Setaria italica | IX:35258940-35260115 (+) | noncoding (-0.073728) | 5e-27 (sp|Q94II3|PMTL_ARATH) | 54 | 9.67 | 3 | Expressed preferentially in root | |
CNT30521851 | Setaria italica | IX:57925053-57925418 (+) | noncoding (-0.065536) | - | 74 | 30.42 | 2 | ||
CNT30521850 | Setaria italica | IX:34171510-34172021 (+) | noncoding (-0.02048) | - | 31 | 7.73 | 2 | Expressed preferentially in root | |
CNT30521848 | Setaria italica | IX:52251096-52251562 (+) | noncoding (-0.0638976) | - | 58 | 0.48 | 2 | Expressed preferentially in root | |
CNT30521846 | Setaria italica | IX:50343855-50349550 (-) | noncoding (-0.0270336) | - | 73 | 2.18 | 7 | Expressed preferentially in root | |
CNT30521845 | Setaria italica | IX:733195-733576 (-) | noncoding (-0.0053248) | - | 54 | 2.86 | 2 | ||
CNT30521843 | Setaria italica | IX:54892725-54893737 (-) | coding (0.26) | - | 54 | 1.1 | 1 | ||
CNT30521842 | Setaria italica | IX:6743200-6764072 (+) | coding (0.157) | 5e-75 (sp|P33629|TBA_PRUDU) | 49 | 2.42 | 4 | Conserved counterparts: CNT30517711, CNT30229012, CNT30533600, CNT30448888, CNT30726419, CNT3075301, CNT3010240, CNT30710214 Expressed preferentially in root |
|
CNT30521841 | Setaria italica | IX:49665743-49666790 (+) | noncoding (-0.0274432) | - | 51 | 62.23 | 2 | ||
CNT30521840 | Setaria italica | IX:46637653-46638945 (-) | coding (0.332) | - | 63 | 1.88 | 3 | ||
CNT30521839 | Setaria italica | IX:50343806-50349541 (-) | noncoding (-0.018432) | - | 63 | 6.89 | 7 | Expressed preferentially in root | |
CNT30521835 | Setaria italica | IX:32538829-32540905 (+) | coding (0.187) | - | 87 | 7.55 | 3 | ||
CNT30521827 | Setaria italica | IX:49819704-49820708 (-) | coding (0.305) | - | 65 | 24.08 | 2 | Conserved counterparts: CNT30135603, CNT30447424, CNT30115726 Expressed preferentially in root |
|
CNT30521825 | Setaria italica | IX:48417453-48418052 (+) | coding (0.245) | 1e-51 (sp|P93472|DIM_PEA) | - | 2.38 | 2 | ||
CNT30521824 | Setaria italica | IX:32238930-32241556 (-) | noncoding (-0.180224) | - | 38 | 29.2 | 3 | Expressed preferentially in stem | |
CNT30521823 | Setaria italica | IX:32054472-32055939 (+) | noncoding (-0.0253952) | - | 71 | 0 | 3 | Conserved counterparts: CNT30577809 Expressed preferentially in root |
|
CNT30521821 | Setaria italica | IX:45592846-45593921 (+) | noncoding (-0.0176128) | - | 47 | 10.66 | 1 | Expressed preferentially in root | |
CNT30521820 | Setaria italica | IX:8471255-8471467 (+) | noncoding (-0.128614) | 0.0000004 (sp|Q9FJB5|RP8L3_ARATH) | 71 | 0 | 1 | ||
CNT30521819 | Setaria italica | IX:16049388-16049683 (+) | noncoding (-0.098304) | - | 59 | 0 | 1 | ||
CNT30521818 | Setaria italica | IX:43502449-43503594 (-) | noncoding (-0.0049152) | 8e-40 (sp|Q9FMF7|DIT21_ARATH) | 66 | 7.38 | 2 | Expressed preferentially in stem | |
CNT30521816 | Setaria italica | IX:57203658-57204227 (-) | coding (0.379) | - | 93 | 9.2 | 2 | Expressed preferentially in leaf | |
CNT30521815 | Setaria italica | IX:2553056-2553722 (+) | noncoding (-0.0548864) | 1e-59 (sp|P36213|PSAD_HORVU) | 55 | 1.01 | 2 | Conserved counterparts: CNT30228866, CNT30577241, CNT30596768, CNT30117304, CNT30113105, CNT3010182, CNT30695406 Expressed preferentially in root |
|
CNT30521812 | Setaria italica | IX:53855841-53857281 (+) | coding (0.101) | 3e-36 (sp|Q8VZ80|PLT5_ARATH) | 100 | 0.23 | 2 | Conserved counterparts: CNT30446083 | |
CNT30521811 | Setaria italica | IX:43497987-43498795 (-) | coding (0.305) | 4e-49 (sp|Q9FMF7|DIT21_ARATH) | 75 | 0.39 | 3 | Expressed preferentially in stem | |
CNT30521809 | Setaria italica | IX:36217651-36217949 (+) | noncoding (-0.119194) | - | 99 | 80 | 1 | ||
CNT30521805 | Setaria italica | IX:5894725-5897543 (+) | coding (0.03) | - | 70 | 1.85 | 3 | Expressed preferentially in leaf | |
CNT30521801 | Setaria italica | IX:52201191-52203165 (-) | coding (0.339) | 3e-20 (sp|Q8GRL4|HOX19_ORYSJ) | 85 | 19.35 | 2 | ||
CNT30521798 | Setaria italica | IV:10395522-10397365 (-) | coding (0.186) | - | 79 | 4.34 | 2 | ||
CNT30521797 | Setaria italica | IV:37596099-37596903 (+) | coding (0.402) | - | 96 | 91.65 | 2 | ||
CNT30521795 | Setaria italica | IV:39503573-39504697 (-) | coding (0.183) | - | 86 | 120.1 | 1 | Conserved counterparts: CNT30476712 | |
CNT30521794 | Setaria italica | IV:13611979-13614766 (+) | coding (0.404) | - | 78 | 43.35 | 2 | Expressed preferentially in leaf | |
CNT30521793 | Setaria italica | IV:12905210-12905607 (-) | noncoding (-0.0856064) | - | 75 | 0.05 | 2 | ||
CNT30521792 | Setaria italica | IV:1860474-1860976 (-) | noncoding (-0.0831488) | - | 68 | 4.7 | 1 | Expressed preferentially in leaf | |
CNT30521789 | Setaria italica | IV:2377005-2378469 (+) | noncoding (-0.0507904) | - | 82 | 0.13 | 3 | Expressed preferentially in leaf | |
CNT30521787 | Setaria italica | IV:1899529-1900373 (+) | noncoding (-0.168755) | - | 60 | 1.07 | 2 | ||
CNT30521786 | Setaria italica | IV:38853327-38853983 (+) | noncoding (-0.004096) | - | 55 | 14.04 | 1 | ||
CNT30521785 | Setaria italica | IV:9997213-9998058 (+) | noncoding (-0.0004096) | - | 51 | 279.24 | 2 | Conserved counterparts: CNT3016350 | |
CNT30521782 | Setaria italica | IV:12146348-12147919 (-) | coding (0.044) | - | 96 | 5.75 | 2 | Expressed preferentially in root | |
CNT30521779 | Setaria italica | IV:12146348-12147919 (-) | coding (0.044) | - | 96 | 4.56 | 1 | Expressed preferentially in root | |
CNT30521778 | Setaria italica | IV:6207604-6219289 (+) | coding (0.284) | - | 61 | 0.3 | 3 | Conserved counterparts: CNT3015919 | |
CNT30521777 | Setaria italica | IV:1370642-1371519 (+) | coding (0.217) | 4e-32 (sp|P06353|H33_HORVU) | 64 | 74.4 | 2 | Conserved counterparts: CNT30130544, CNT30474628, CNT30596421 Expressed preferentially in leaf |
|
CNT30521775 | Setaria italica | IV:11886575-11887427 (+) | noncoding (-0.151142) | 2e-35 (sp|P46690|GASA4_ARATH) | 36 | 2.49 | 1 | Conserved counterparts: CNT30102333 Expressed preferentially in leaf |
|
CNT30521774 | Setaria italica | IV:28034465-28038470 (+) | noncoding (-0.0565248) | - | 93 | 331.97 | 3 | Conserved counterparts: CNT30475137, CNT3016423 Expressed preferentially in root |
|
CNT30521773 | Setaria italica | IV:34123540-34124817 (+) | coding (0.58) | - | 80 | 0.68 | 2 | ||
CNT30521771 | Setaria italica | IV:3240626-3241112 (+) | noncoding (-0.0811008) | - | 67 | 1.31 | 2 | ||
CNT30521770 | Setaria italica | IV:26752195-26752643 (-) | noncoding (-0.0372736) | - | 53 | 0.26 | 2 | ||
CNT30521769 | Setaria italica | IV:2600721-2601010 (-) | noncoding (-0.04096) | - | 70 | 9.13 | 2 | ||
CNT30521767 | Setaria italica | IV:12522883-12526891 (+) | noncoding (-0.032768) | - | 52 | 7.68 | 2 |