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Detailed information on CNT30117304


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 1e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695406Oryza nivaraOryza sativa74.8990.3999.85677forward
CNT30554655Oryza nivaraOryza glaberrima91.1594.1799.64824forward
CNT30577567Oryza nivaraOryza barthii95.4610098.26863forward

Expression of CNT30117304

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 2 (33 aa)
TLMNTHQNSPNIYYNIIRRDYIPPSIDYTIINN*

>peptide 3 (32 aa)
MAMVVGGGERRVPCGRFDSSGVVWRREISEME*

>peptide 4 (31 aa)
VNEHASKFTKHILQYYKKRLYPTIDRLHHHQ*

Sequence

>CNT30117304
ACGTTAATGAACACGCATCAAAATTCACCAAACATATACTACAATATTATAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATCAATAACT
GAAGAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAAGAAGTCT
AGATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTT
GACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGG
AGCCTGGTGCCCAGGGCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAACA
CCTGCTCCTTGGGCGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACGGCGT
GTTGGGGTCCAGCTGCGGCGGCACGAACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTCGCCGCCGCGGCGGGCTGATCCTCCGCCGCCGCTCTGAGGGAG
GTGGGTGCCCTCGAGGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGTAGATTCGAT
TCGAGTGGTGTGGTGTGGAGGAGAGAGATATCGGAGATGGAGTAAGAAGAAGAGAGGGGAAATGGGTGAGGAAGTGGATAAGGGGATATGAGGTTGGCCA
ATGG