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Detailed information on CNT30695406


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577567Oryza sativaOryza barthii75.365.35100564forward
CNT30117304Oryza sativaOryza nivara75.362.39100564forward

Expression of CNT30695406

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 2 (32 aa)
MAMVVGGGERRVPCGGFDSSGVVWRREISEME*

Sequence

>CNT30695406
TACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAAGAAGAAGTCTAGATGTCGAAGACGTTCTTGCCGGT
GAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCC
TTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGGAGCCTGGTGCCCAGGGCCAGGCACT
GCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAACACCTGCTCCTTGGGCGACGTCCATGT
GATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACGGCGTGTTGGGGTCCAGCTGCGGCGGCACG
AACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTCGCCGCCGCGGCGGGCTGATCCTCCGCCGCCGCTCTGAGGGAGGTGGGTGCCCTCGAGGTGGCACTTG
GCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGTGGATTCGATTCGAGTGGTGTGGTGTGGAGGAGAG
AGATATCGGAGATGGAGTAAGAAGAAGAGAGGGGAAATGGGTGAGGAAG