Detailed information on CNT30135603


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 4e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678262Lolium perenneSetaria viridis14.1638.693.94132forward
CNT30521971Lolium perenneSetaria italica43.8850.4390.95409forward
CNT30295400Lolium perenneTriticum aestivum49.7962.6292.03464forward
CNT30223111Lolium perenneHordeum vulgare42.3852.8893.67395forward
CNT30391395Lolium perenneTriticum turgidum34.3353.8792.5320forward
CNT30662909Lolium perenneTriticum dicoccoides64.1678.8989.3598forward
CNT30447424Lolium perenneSaccharum spontaneum49.8941.8989.46465forward
CNT3016557Lolium perenneZea mays37.6659.3986.61351forward
CNT30228651Lolium perenneAnanas comosus27.0442.7182.54252forward
CNT30653577Lolium perenneRosa chinensis13.9524.6782.31130forward
CNT30683548Lolium perenneTriticum urartu49.7944.1992.24464forward
CNT30344893Lolium perenneEragrostis tef18.5640.3391.33173forward
CNT30579043Lolium perenneEchinochloa crusgalli33.9141.7489.24316forward
CNT30115726Lolium perenneOryza nivara23.9353.7394.17223forward

Expression of CNT30135603

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GLSVHEQFTQLFPKENFGDQIKNQKTVVYKRIIHLYLITKLHS*

>peptide 2 (97 aa)
MAGSVRSKSNSFAFSIWAASAGSGEARELLEEGPRPRRRRGAGGGHGLEKRPARGAGGGGCSHHSRRHGWVREREEESGVVAVWWGEWRRAAIYPNGL

>peptide 3 (39 aa)
MAWACSSSCRTSSEASLTPPSSARILASRSSMKLPSGEK*

Sequence

>CNT30135603
GGGCTTATCAGTCCATGAACAGTTCACTCAACTCTTCCCCAAAGAAAACTTTGGGGATCAAATCAAAAATCAAAAGACAGTAGTATACAAAAGGATCATT
CATTTATACTTGATCACAAAATTACATTCTTAAGGGGAGCCGGGCCACTAACCCAGCCGCGTATACGTTACACACGAAGAACTAGATAGAAATGTTTACT
GAAGGATCGCGCCGGCAGGTGCGTGCTGCTGTGATCTGTTGTGTTTTCACGCGGATGGGAGCACCTTCTTGACGATCTCTTCGCTGAGGGACGCGATCTG
GGCGTCGAGCGCCTTGACGGCCTCCTCCTTCTGCGCCTCGAGGGTGGAGAGCGCCTCCACGAGCTCGGCCTCCACGCGCTGGCGGCCCTCGTCCAGCTTC
GCCTCCAGCTCCTTGGTGGTCTCCTTCTTCATCTTGTTGAGCGCGGCGGCGATCTCCGCGCGGGCGGCCTTGAGGATGGCCTGGGCCTGCTCCTCCAGCT
GCCGCACCTCCTCGGAGGCGTCCTTGACGCCGCCCAGCTCGGCCCGGATCTTGGCGTCCCGCTCGTCCATGAAGTTGCCCAGCGGCGAGAAGTAGAGCTT
GTCCAGCGCCACCATCAGCAGCAGGAACTCGATCGTGATGGCCGGGAGCGTCAGGTCGAAGTCGAACAGCTTCGCCTTCTCTATCTGGGCAGCCAGCGCC
GGGAGCGGCGAGGCCCGGGAGCTGCTTGAGGAGGGACCGCGGCCTCGGCGGCGGCGCGGAGCTGGAGGAGGCCACGGGCTTGAGAAGCGCCCGGCGCGGG
GAGCAGGAGGTGGTGGCTGCAGCCATCATAGCCGTCGCCATGGGTGGGTGAGAGAGAGGGAGGAGGAGAGTGGAGTTGTGGCCGTGTGGTGGGGAGAGTG
GAGGCGGGCGGCTATCTATCCGAACGGCTTGG