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Detailed information on CNT30517711


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 6e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677932Juglans regiaSetaria viridis39.8128.3685.78211forward
CNT30521842Juglans regiaSetaria italica39.8122.8685.78211forward
CNT30640127Juglans regiaNymphaea colorata36.624.3187.11194forward
CNT30532757Juglans regiaEucalyptus grandis25.2830.4589.55134forward
CNT30547493Juglans regiaIpomoea triloba40.7519.3288.89216forward
CNT30702815Juglans regiaQuercus lobata30.9444.5790.24164forward
CNT30371538Juglans regiaArabidopsis thaliana40.5745.2686.51215forward
CNT30618174Juglans regiaSesamum indicum27.5533.886.3146forward
CNT3021397Juglans regiaCitrullus lanatus21.3217.0786.73113forward
CNT3071007Juglans regiaQuercus suber26.627.5982.98141forward
CNT30504800Juglans regiaNicotiana attenuata40.5748.6487.44215forward
CNT30709049Juglans regiaGlycine max42.6432.6184.51226forward
CNT3098615Juglans regiaSolanum tuberosum24.1524.9587.5128forward
CNT30177039Juglans regiaSecale cereale40.3815.7686.92214forward
CNT30284381Juglans regiaTriticum aestivum40.3828.0187.85214forward
CNT30224654Juglans regiaHordeum vulgare37.1712.983.76197forward
CNT30391523Juglans regiaTriticum turgidum39.8128.6385.31211forward
CNT3086234Juglans regiaVigna radiata34.3434.3485.71182forward
CNT30553152Juglans regiaOryza glaberrima31.724.2885.12168forward
CNT30144939Juglans regiaMedicago truncatula62.6468.1783.43332forward
CNT30439881Juglans regiaAegilops tauschii22.4515.5188.24119forward
CNT30247087Juglans regiaAvena sativa40.3829.2388.32214forward
CNT30655738Juglans regiaTriticum dicoccoides40.3831.887.85214forward
CNT3059767Juglans regiaArabidopsis lyrata48.336.1185.16256forward
CNT30265526Juglans regiaBrassica rapa4021.3587.74212forward
CNT30445643Juglans regiaSaccharum spontaneum39.8123.7985.31211forward
CNT30136973Juglans regiaLolium perenne18.6823.5789.999forward
CNT30953Juglans regiaZea mays35.4719.8785.11188forward
CNT3041114Juglans regiaChlamydomonas reinhardtii22.4516.9383.19119forward
CNT30229012Juglans regiaAnanas comosus41.1326.387.61218forward
CNT30219368Juglans regiaKalanchoe fedtschenkoi27.7425.1786.39147forward
CNT30204030Juglans regiaHelianthus annuus37.1747.4793.4197forward
CNT30624589Juglans regiaDaucus carota20.1921.5787.85107forward
CNT30689745Juglans regiaTriticum urartu40.3828.0888.32214forward
CNT30721351Juglans regiaTriticum spelta20.7516.6286.36110forward
CNT30344814Juglans regiaEragrostis tef23.0230.6581.15122forward
CNT30361562Juglans regiaSorghum bicolor39.2521.0385.58208forward
CNT30358630Juglans regiaLactuca sativa30.3841.0785.71161forward
CNT30371350Juglans regiaOryza glumipatula37.1724.0281.73197forward
CNT30481833Juglans regiaChara braunii23.0241.3683.61122forward
CNT30430260Juglans regiaPapaver somniferum41.737.9790.05221forward
CNT30570286Juglans regiaVitis vinifera41.1344.3188.07218forward
CNT3052700Juglans regiaAmborella trichopoda16.4227.5391.9587forward
CNT3024728Juglans regiaPopulus trichocarpa45.0929.4388.7239forward
CNT30100887Juglans regiaOryza rufipogon38.6826.6283.9205forward
CNT30575727Juglans regiaOryza barthii17.3620.6789.1392forward
CNT30582828Juglans regiaEchinochloa crusgalli40.9425.2986.18217forward
CNT30117950Juglans regiaOryza nivara21.3213.6384.96113forward
CNT30558847Juglans regiaPanicum hallii20.7514.9190110forward
CNT30333509Juglans regiaCynara cardunculus28.6827.6483.55152forward
CNT30726259Juglans regiaLupinus angustifolius42.2627.0291.07224forward

Expression of CNT30517711

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MNHPEQLNTPRLHHPRLQLTQHQLPHNPSREQQDPHELQRILLPPYLHPHTSVQRHVWHT*

>peptide 2 (75 aa)
MRSNLWSMRENTSATLVEFEIMQTALCTLARSLGTTSPRYMRQHAMYLPWRGSHLAIMDEGSKALLVISATESCS*

Sequence

>CNT30517711
TAGAGATTAACAACAGGAACTGAGTTTAGTTGCACACATACAAAGCATCACACAGCATAACATCAGGCACTGTAAATAGATAAAACATCAATTCTCCAAA
ACCTCACGGAAATGAACCACCCAGAGCAACTTAATACTCCTCGCCTTCATCATCCTCGCCTTCAGCTGACTCAGCACCAACTTCCTCATAATCCTTCTCG
AGAGCAGCAAGATCCTCACGAGCTTCAGAGAATTCTCCTTCCTCCATACCTTCACCCACATACCAGTGTACAAAGGCACGTTTGGCATACATGAGGTCAA
ACTTGTGGTCAATGCGGGAAAACACCTCAGCCACGCTGGTTGAGTTCGAGATCATGCAAACAGCCCTCTGCACCTTGGCAAGATCTTTAGGCACAACATC
ACCACGGTACATGAGGCAGCATGCCATGTACTTGCCATGGCGAGGATCACACTTGGCCATCATGGATGAGGGTTCAAAAGCACTGTTGGTGATTTCAGCC
ACTGAGAGTTGTTCGTGATATGCTTTCTCA