SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30522249 Setaria italica IX:17421346-17422438 (-) coding (0.095)- 96 1.47 1
CNT30522247 Setaria italica IX:52681683-52682218 (+) coding (0.33)- 52 3.59 1
CNT30522246 Setaria italica IX:46637653-46638944 (-) coding (0.294)- 63 0.39 3
CNT30522243 Setaria italica IX:58202088-58206717 (-) noncoding (-0.02048)- 43 7.12 2
CNT30522242 Setaria italica IX:21476248-21477358 (-) noncoding (-0.053248)- 75 4.59 2
CNT30522240 Setaria italica IX:8009089-8010227 (+) noncoding (-0.142541)7e-32 (sp|P29250|LOX2_ORYSJ) 74 0 2
CNT30522239 Setaria italica IX:47610093-47614595 (+) noncoding (-0.024576)5e-20 (sp|Q9SQQ9|PHL9_ARATH) 79 4.51 6Conserved counterparts:
CNT30522238 Setaria italica IX:43207280-43207779 (-) noncoding (-0.06144)- 51 292.03 2
CNT30522235 Setaria italica IX:2529794-2531762 (+) coding (0.227)- 43 1.92 3Conserved counterparts:
CNT30522234 Setaria italica IX:42433836-42435081 (-) noncoding (-0.135168)- 60 172.16 2
CNT30522232 Setaria italica IX:14781472-14782630 (+) coding (0.146)6e-123 (sp|Q42850|PORB_HORVU) 55 771.03 2Conserved counterparts:
CNT30522231 Setaria italica IX:43922558-43922975 (-) coding (0.268)- 84 4.76 2
CNT30522230 Setaria italica IX:54980925-54981287 (-) coding (0.839)- 76 0.29 2
CNT30522228 Setaria italica IX:48440002-48440697 (+) noncoding (-0.0274432)- 85 0 2
CNT30522226 Setaria italica IX:12182019-12183222 (+) coding (0.117)8e-40 (sp|P15192|CB22_PINSY) 69 15.86 2Conserved counterparts:
CNT30522223 Setaria italica IX:23428872-23430627 (+) noncoding (-0.0131072)4e-129 (sp|Q8S6N5|ACC1_ORYSJ) 90 6 3
CNT30522221 Setaria italica IX:41938548-41940578 (+) coding (0.385)0.0000001 (sp|P10978|POLX_TOBAC) 71 5.93 2Conserved counterparts:
CNT30522215 Setaria italica IX:34261400-34262037 (+) noncoding (-0.0094208)- 53 9.8 2
CNT30522214 Setaria italica IX:43206963-43207772 (-) coding (0.121)- 53 21.61 2
CNT30522213 Setaria italica IX:32054358-32055942 (+) noncoding (-0.0278528)0.000000004 (sp|Q9T0I5|PRP4_ARATH) 71 0.22 3Conserved counterparts:
CNT30522212 Setaria italica IX:6763381-6763755 (+) noncoding (-0.110182)2e-46 (sp|Q6VAG0|TBA2_GOSHI) 55 21.77 2Conserved counterparts:
CNT30522210 Setaria italica IX:35191145-35194134 (+) coding (0.184)- - 19.32 2
CNT30522209 Setaria italica IX:43491692-43508943 (-) noncoding (-0.0004096)0.000000004 (sp|Q6L3Z4|R1B12_SOLDE) 55 3.53 2
CNT30522208 Setaria italica IX:58262812-58263679 (-) coding (0.138)- 58 6.14 2
CNT30522207 Setaria italica IX:42719168-42720024 (-) coding (0.243)- 94 3.7 2Conserved counterparts:
CNT30522204 Setaria italica IX:18785993-18786656 (+) noncoding (-0.0004096)- 48 3.19 1
CNT30522203 Setaria italica IX:12182191-12183207 (+) coding (0.268)2e-122 (sp|Q10HD0|CB23_ORYSJ) 64 25.65 2Conserved counterparts:
CNT30522199 Setaria italica IX:5274082-5274421 (+) noncoding (-0.109363)- 96 9.22 2
CNT30522197 Setaria italica IX:10063290-10073679 (+) noncoding (-0.0004096)- 34 14.67 2
CNT30522192 Setaria italica IX:27450648-27500721 (+) noncoding (-0.04096)- 36 1.55 2
CNT30522188 Setaria italica IX:768108-768654 (-) coding (0.528)1e-38 (sp|Q9STM6|GDL57_ARATH) 58 0.27 2
CNT30522187 Setaria italica IX:57925053-57925364 (+) noncoding (-0.0004096)- 63 0 2
CNT30522185 Setaria italica IX:43168351-43168658 (+) coding (0.505)- 93 78.43 2
CNT30522183 Setaria italica IX:12182066-12183211 (+) coding (0.321)5e-79 (sp|P14279|CB25_SOLLC) 72 4.04 3Conserved counterparts:
CNT30522180 Setaria italica IX:55798788-55804359 (-) noncoding (-0.14377)- 94 106.4 2
CNT30522178 Setaria italica IX:6345063-6345699 (+) noncoding (-0.185958)- 60 0.3 2Conserved counterparts:
CNT30522175 Setaria italica IX:1878481-1879198 (+) coding (0.344)3e-20 (sp|Q42410|ZAT12_ARATH) 98 0 2
CNT30522173 Setaria italica IX:54342181-54343697 (-) coding (0.349)- 96 1301.45 1
CNT30522168 Setaria italica IX:12182066-12183216 (+) coding (0.29)3e-125 (sp|Q10HD0|CB23_ORYSJ) 66 2.75 3Conserved counterparts:
CNT30522167 Setaria italica IX:1122485-1138438 (-) coding (0.056)- 78 6.7 2
CNT30522166 Setaria italica IX:43497819-43498823 (-) coding (0.363)3e-53 (sp|Q9FMF7|DIT21_ARATH) 75 1.73 3
CNT30522165 Setaria italica IX:12182035-12183222 (+) coding (0.335)2e-128 (sp|Q10HD0|CB23_ORYSJ) 36 1.54 3Conserved counterparts:
CNT30522162 Setaria italica IX:43492399-43509631 (-) coding (0.25)0.0000000006 (sp|Q8W3K0|RPP7_ARATH) 80 11.59 2
CNT30522160 Setaria italica IX:23763373-23765729 (-) noncoding (-0.028672)- 71 1.34 3
CNT30522158 Setaria italica IX:9385017-9386207 (-) coding (0.222)- 55 88.09 2
CNT30522156 Setaria italica IX:47099801-47100328 (+) coding (0.229)- 80 0.57 2
CNT30522155 Setaria italica IX:58595770-58596672 (+) coding (0.198)2e-114 (sp|Q8H7U1|TBB2_ORYSJ) 68 26.67 2
CNT30522153 Setaria italica IX:14371720-14372152 (-) noncoding (-0.106496)- 68 173.97 2
CNT30522152 Setaria italica IX:48039062-48039692 (+) noncoding (-0.0638976)2e-21 (sp|O22893|GOLS1_ARATH) 71 1.02 2
CNT30522150 Setaria italica IX:49819730-49820728 (-) coding (0.361)2e-29 (sp|P31853|ATPF2_SPIOL) 68 2.89 3Conserved counterparts: