« Back to Triticum urartu search


Detailed information on CNT30689031


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H49|RR3_WHEAT, E-value = 8e-156

BLAST vs NONCODE:
NONOSAT001021, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693436Triticum urartuOryza sativa44.3147.2191.72471forward
CNT30503443Triticum urartuNicotiana attenuata4.269.2381.2234forward
CNT3048584Triticum urartuPrunus dulcis3.8666.7788.37215forward
CNT30637715Triticum urartuCapsicum annuum2.0135.4488.39112reverse complement
CNT30185636Triticum urartuSecale cereale14.5452.3299.14811forward
CNT30224357Triticum urartuHordeum vulgare27.1100.0796.821511forward
CNT30396291Triticum urartuTriticum turgidum6.910099.22385reverse complement
CNT30585847Triticum urartuMusa acuminata2.5121.4487.86140forward
CNT3086712Triticum urartuVigna radiata3.9874.581.08222forward
CNT30511668Triticum urartuSolanum lycopersicum1.7933.2288100forward
CNT30147499Triticum urartuMedicago truncatula6.8524.2480.1382forward
CNT3076567Triticum urartuBrassica juncea2.0130.8591.07112forward
CNT30135270Triticum urartuLolium perenne28.6246.4293.981596forward
CNT30228020Triticum urartuAnanas comosus11.0544.5488.96616forward
CNT3068454Triticum urartuLeersia perrieri10.0891.3894.13562forward
CNT30205112Triticum urartuHelianthus annuus2.9461.6584.15164forward
CNT30351320Triticum urartuEragrostis tef4.39100.4193.88245forward
CNT30364284Triticum urartuSorghum bicolor1.4933.3395.1883reverse complement
CNT30620547Triticum urartuCajanus cajan4.1473.5784.42231forward
CNT30371107Triticum urartuOryza glumipatula7.5710091.23422forward
CNT3059025Triticum urartuAmborella trichopoda11.0351.0480.81615forward
CNT30576477Triticum urartuOryza barthii560.7896.77279forward
CNT30116873Triticum urartuOryza nivara3.628.8498.01201forward
CNT30604560Triticum urartuOryza punctata17.6897.9194.02986forward
CNT30550799Triticum urartuOryza brachyantha6.3826.4390.73356forward

Expression of CNT30689031

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MLYHIAFYDVIHRPYIVESYILFISSSFFLSSLPLSTSL*

>peptide 2 (40 aa)
MLRIRANDSNSSTPTNQSTFCTNFTNGSSYFHISVSFFKL*

>peptide 3 (52 aa)
MTWIVSISFWISICVITSELEPESIFLLCVITSELESDSIFLFEPFFLFFCI*

>peptide 4 (59 aa)
MIYQFSLNLIERGIISSFAGISGKKSLVIFYSINGQNPKTRLLILRLRISKFLHLILHR*

>peptide 5 (37 aa)
MFSVIFVDTTRTVPFLFMSAFLIEVSKSAIVSLPIRL*

>peptide 6 (39 aa)
MLFFMGKLRPRARGLNFFIIVLLLTSALVINKFALSKSL*

>peptide 7 (34 aa)
MVLFLSSISTAKLDMRVSSHPAPREWNQKACKFL*

>peptide 8 (33 aa)
SIFLEKVSRVFHFHSHKKKYYNSHFEQAWIQHL*

>peptide 9 (35 aa)
MQKDERNIVFPERKTEHFFLSSIPLLGFYISNRIN*

>peptide 10 (32 aa)
MKVESGLILLQTSFFRRSTSIMRHRCYIAYTT*

>peptide 11 (30 aa)
MCVYIYLNSIFIDNVILLKKILIFTLIESR*

>peptide 12 (33 aa)
MARNAASLPLPAPFTITSARCKPTVRIASTAVL*

>peptide 13 (33 aa)
MTHAFFYGETTSSSSRSEFLHNSTPTDFGFSNK*

>peptide 14 (44 aa)
MVRSESRNGASKKFLSELIFSVLLTRAALYYCFKFVVLVSSYNF*

>peptide 15 (46 aa)
MTLIRPRLRISRHFVQILRTEALIFIFPYPFLNYESNLLEKISLFA*

>peptide 16 (60 aa)
MMVSFSSRTRNIPLGRASVTKPSKVTFASLGFFFSLLFFFSVIFFFSYFSIFILKIGRAR*

>peptide 17 (36 aa)
MVFLGCTKSETEWIYFLSHIFLFYIFFTGNRNLRWI*

Sequence

>CNT30689031
AGTCCATATTTCTAGAAAAAGTATCTCGTGTTTTTCATTTCCATTCCCACAAGAAAAAATACTATAATTCACATTTCGAACAGGCATGGATACAGCATCT
ATAGGATAACTTCCATCTTGATAGTTCTTTCTGAGTTCTGTCTGATATCCACGATCTCTCTTGATCTGTAAATCAATACAGAAATCAATGGGCTCTGTCA
AGTTAGCTATAGGTTGTGCCGTATCAACGATTTCTACGGAAGGCGGTAAGATGATATCTTGAGCAGTTATGTATCTAGGACCTTTGACGCAAATGGATGC
GTCTCTAACTCCATAGAGATTACTTCTCAATACAATTTCTTTCAAATTTAGTAAAATTTCTTGTACGGATTCTTCAATACCTGCTATTGTAGAATACTCG
TGCGGCACGCTCCCAAATTTTGCACGTGTGATACATGTTCCTTCTATTTCTCCAAGTAAAGCTCTTCGCAAGGCAATACCGACGGTGTCCGCTTGACCTT
TTCTAAGCGGGGACAGAATGAAACGACCATAATAAAGGCGCTTACTATCTACTCTTGATTCAACACACTTCCACTGTAGTGTTTGAGTGGATCCTGCTAC
CTCCTCTCGAACCATAATAGACTAGTATTATTATTTTATCATTGAATCGTTTATTTCTCTTGAAATGAAAGTTGAAAGCGGGTTAATTCTTTTACAGACG
TCTTTTTTTAGGCGGTCGACATCCATTATGCGGCATAGGTGTTACATCGCGTATACAACTTAATCGCACACCACTTTTAGCAATGGCTCGTAATGCGGCA
TCTCTTCCACTACCAGCGCCCTTTACCATAACTTCTGCTCGTTGCAAACCTACTGTACGAATAGCATCTACTGCTGTTCTTTGACCAGCATAGGGTGATG
CTTTTCTTGAGCTTTTGAATCCACAAGTACCGGCCGAGGACCAAAAAACCACCCGACCTTGTGGGTCTGTAACAGTTATAATGGTATTGTTGAAACTAGC
TTGAACATGAATAACCCCTTTTGTTATTCTACGTGCACTCTTCCGTAAACTAAAACGTGCATTCCTACGTAAACCAATACGCACTTTCTTACGTGAACCA
ATTTTTGGTATAGCTTTTGCCATATTTTATTATCTCATAAATATGAGTTAGAAATAAAAAAAAGAAAAAAAGATACAAAGATATCCGTTTCAGGGTAAAA
TAAACCCTTTACTTTAATTATTTTAAATGAAATTATTTTATTTGGAATTGGAACATTTCCGCGGGTACTTTTTTTTACTTTTTAGAAAGTAAAGTTCTTT
TTCGAAAGATTACCCCTGTCTTTGTTTATGCTTCGGATTAGAGCAAATGACTCTAATTCGTCCACGCCTACGAATCAGTCGACATTTTGTACAAATTTTA
CGAACGGAAGCTCTTATTTTCATATTTCCGTATCCTTTTTTAAACTATGAATCTAATCTTTTGGAAAAAATAAGTCTCTTCGCTTGAATTTTAGAACTTA
GAATTTATTACCCTAGAAAAAAAAAGAAAAACCTAATCCTTTGAATCTTTGGTATCCTTCAAATCTTCGCTATCCTTCAAATCTTCGCTATCCTTCGAGT
CTTCGATACGCTTCGAATCCTTATGGGGAAGTCTATAAATTATACGTCCCTTGCTTGAATCATAACGACTTACTTCAATTTTGACCCTATCCCCCATCAG
TATTCGTATAGAACTAGACCGTATCTTTCCTGAAATATAGCCTAGGATGATGGTGTCATTCTCTAGCCGAACGCGGAACATTCCATTGGGTAGGGCTTCC
GTAACTAAACCTTCGAAAGTTACTTTTGCTTCTCTCGGGTTTTTTTTTTCTCTCCTATTTTTTTTTTCTGTCATATTTTTTTTCTCCTATTTTTCTATTT
TTATTTTAAAAATAGGAAGGGCGAGATAGAATTCGAGCACTATAGGCGGGGCGATTACCATATATAACATAAGACTTCTCCCCCAATTCTGTTTAGTCGA
GCTTCTCGATCTGTCATTATTCCTCGAGAAGTAGAAAGAATAGCAATTCCCATTCCACCCAAAACTTTAGGAATTCCTTGATAGTTGGTATAAATTCGTA
AGCCGGGTCGGCTGATACGCTTTAAAAAGGTTCTTGTTCTATATATTCCTTTTATAGTCTTTCTCTTTTGATGTCGCAAAGTTGAAACCAAGAAATATCT
GTTACGTTCCTGATGTTTCCGAACACTTTCAATAAAACCCTCTCGTAGAAGTATTTTAACAATGTTTTCGGTAATATTTGTAGATACTACTCGAACTGTT
CCTTTTTTATTCATGTCCGCATTTCTTATAGAGGTTAGTAAATCAGCAATAGTGTCCTTGCCCATAAGACTCTAATTCTAGGTTCCTCCTAATTTTTCTA
TAATCAACATGTTTTCTTTTTTTTTTTTTCATTTTGGATTTTAAAACATATACGTAAAACACAATCTACTAAATTAATTCTTTGGTCTCAATTTCGCCTA
CTAGTATTTATAATACTTCAGGAGCTAATGAAACTATTTTGGTAAAATTCAATTCTCTCAATTCCTCGGCAATCGCGCCAAAAACTCGAGTTCCTTTTGG
ATTGCCTTTTTGATCAATTATAACCGCAGCATTGTCATCATAGCGGATTATTATACCGTCTTCGCATTTGAACTCTTTACATGTACGTACAATTACAGCT
CGAATTACTTCGGATCTTTCTAGAGGCATTTGGGGCAATGCGTCTTTGATTACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCAGCAG
CTCCTATGACTCGAATACACATCAATTTTCGAGCTCCACTATTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTATTTTGATTTCAATTTGT
TATTTCAATGCAAAAGGATGAAAGAAATATTGTCTTTCCAGAAAGAAAAACCGAGCATTTTTTTTTATCTTCCATACCCCTTTTAGGGTTCTATATCTCT
AATCGAATAAATTGACTTCGTATGGGCATTTTACTGGCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCAGATACTCCCCCCATTTCATAAAGTATAC
GACCAGGTTTAACAACGGATACCCAATATTCGGGGGACCCCTTTCCCGAGCCCATACGTGTTTCCGTGGGTCTTAGTGTAACCGGTTTGTCGGGAAATAT
ACGTACCCATATTTTTCCACCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCCGTGATCCAAGCGGGTTCAAGTGCTTGA
AGAGCATATCTACCAAAACAAATACGATTGCCTCGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGCGAAATCTGGTTCTTTTGGGGTTATAGT
CGATGGTTCTCTTTCTTAGTTCCATCTCTACTGCAAAACTGGACATGAGAGTTTCTTCTCATCCAGCTCCTCGCGAATGGAATCAGAAAGCATGTAAATT
TCTCTAATTCATAATATTCCAAAATATTACGGTACGGATAGATACACATTAATAGATAATAGAAAAAGTTCGGTTTTTTTTATATTGAATTTGTTAAAAC
AGAAAAATATAATATATAGTCAAAAAAGAAGATCTAGAATATATCCAGATGTGTGTGTATATTTATCTAAATTCTATATTTATAGATAATGTAATCCTTC
TTAAAAAAATCCTTATTTTTACTCTTATTGAATCGCGGTAAAGTATTCTAATTCAATAAGAATTTCGCGGGCGAATATTTACTCTTTCCTGTCTTATTTG
TTAATTTATAAACTTACCAAATAAGACAATTTTTTTGGTTTGTTCCGCCATCCCACCCAATGAAGTGTTAGGATTCTTTTCAATAAAATCCTATGGAATC
ATAGGTTCTGTCGTTCCCACTGCTTCTCCTTGAATGGTTAGGTCTGAATCCCGCAACGGAGCTTCCAAAAAATTTCTTTCCGAGTTAATTTTCTCAGTTT
TATTAACCCGGGCGGCTCTTTATTATTGCTTTAAATTTGTAGTTCTTGTTTCAAGTTACAATTTTTAATTCTCTATTATTTTTATTATATTGATGCTTTA
TCACATTGCCTTTTATGATGTAATTCATAGACCATACATAGTGGAATCCTATATCTTATTTATTTCCTCTTCCTTCTTTCTATCATCCCTCCCTTTATCC
ACATCCCTTTAGTTTTGCTTCACAACCTAGAATCCCTTTTCTTTTTTAGAGAAAAAATTGCAGTTGCTACAACTATATGACACATCTACTCATTTATGTT
ATGATAGAGGTATTTATTCATATAGTGACTGTTTCTTAGTTAGGATCTCGACAATACGAAGCAATAGGTTGGTTATTAGTTAATTTTCTATAATTACTAA
GTTTTTTTCTTAAAAAAAAGAAAAAAATAACGAGTCACACACTAAGCATAGCAATTATATTAAATGATTTATCAATTTTCATTAAATCTTATAGAAAGAG
GTATAATTTCTTCTTTTGCAGGGATTTCAGGAAAAAAGTCTCTTGTCATTTTTTATTCTATCAATGGACAGAATCCGAAGACAAGATTACTTATTCTTCG
TCTACGAATATCCAAATTTTTACACCTAATACTCCATAGATAGTCCGAATTGGATAGCAGCAATAATCAATTTTAGCGCGAATTGTTTGGAGGGGAAGTC
TACCCTTTTTAATAGATTCGGCGCGTGCAATTTCTTTTCCTCCGAGACGACCCGCAATTTTTACTTTTACTCCCCTTATATCTGCTTTTTTAGTTAATTC
AATGGCTTTTTTCATTGCCTTTCGGAATGAAACTCTATTTTTTAATTGGAAAGCTATATATTCTGCAAGAATGTTAGGCTGTCTATAAGGTTCTTTAACT
TTTTCGATAGAAATATTAAATCTCTGGTTTACAGAGTTAATTTCCTTTTGTAGATCTTTCTCTAATTCTTCGATTGCTCCTTTTTTCTTTAATAAATTTG
GGAATCCAATATGGATTATGACGTGGATCGTATCGATTTCTTTTTGGATTTCTATATGTGTAATTACTTCGGAACTTGAACCTGAGTCCATTTTTCTATT
ATGTGTAATTACTTCGGAACTTGAGTCTGATTCTATTTTTCTATTCGAGCCCTTTTTCCTATTCTTTTGTATATAGTTCTTGATACAATCCCTTATTTTT
TTATCTTCCTGTAGACCTTCAGAATAATTTTTTGGTTGTGCGAACCAAAAGGAATGGTGTTTTTGGGTTGTACCAAGTCTGAAACCGAGTGGATTTATTT
TTTGTCCCATATTTTTCTATTCTATATTTTTTTTACTGGGAATCGAAATCTTAGATGGATCTAAAGGTTATTTAGATTTCTTTACTATATTTAGTACAAT
TGTTATATGACACATGCTTTTTTTTATGGGGAAACTACGTCCTCGAGCTCGAGGTCTGAATTTCTTCATAATAGTACTCCTACTGACTTCGGCTTTAGTA
ATAAATAAATTCGCTTTGTCGAAATCCCTATAATGAGTAGCATTTGCGGCTGCCGAATAAACCAACTTTAAGATGG