Detailed information on CNT30351320


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H52|RR8_WHEAT, E-value = 1e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Eragrostis tefOryza sativa100.415.8696.73245forward
CNT30550215Eragrostis tefIpomoea triloba502.6683.61122forward
CNT30541469Eragrostis tefBrassica napus507.9782.79122forward
CNT30553279Eragrostis tefOryza glaberrima100.4122.8196.73245forward
CNT30147499Eragrostis tefMedicago truncatula39.346.0984.3896forward
CNT30438367Eragrostis tefAegilops tauschii30.3330.5893.2474forward
CNT3083474Eragrostis tefBrassica juncea503.6582.79122forward
CNT30134355Eragrostis tefLolium perenne100.419.7393.06245forward
CNT30689031Eragrostis tefTriticum urartu100.414.3993.88245forward
CNT30434619Eragrostis tefPapaver somniferum50.4118.3684.55123forward
CNT3059026Eragrostis tefAmborella trichopoda39.346.6983.3396forward
CNT30576477Eragrostis tefOryza barthii87.346.4196.24213forward
CNT30585636Eragrostis tefEchinochloa crusgalli100.414.2795.92245forward
CNT30604550Eragrostis tefOryza punctata10011.1489.75244forward

Expression of CNT30351320

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SICHYTLRSKKNSNSHSAQNFRNSLIVSINS*

Sequence

>CNT30351320
CTCGATCTGTCATTATACCTTGAGAAGTAAAAAGAATAGCAATTCCCATTCCGCCCAAAACTTTAGGAATTCCTTGATAGTTAGCATAAATTCGTAAGCC
AGGTCGGCTGATACGCTTTAAAAAGTTCTAGTTCTATATATTCCCTTTCTAGTTTTTTTCTTTTGATGTCGCAAAGTTGAAACCAAGAAATATCTGTTAC
TTTCTTGATGTTTCCGAACACTTTCAATAAAACCCTCTCGTAGA