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Detailed information on CNT3086712


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Vigna radiataOryza sativa74.55.3182.88222forward
CNT30641762Vigna radiataNymphaea colorata70.816.0885.78211forward
CNT30405603Vigna radiataBeta vulgaris36.2414.1488.89108forward
CNT30196572Vigna radiataPisum sativum55.3716.4389.7165forward
CNT30503443Vigna radiataNicotiana attenuata71.4863.0291.55213forward
CNT3047594Vigna radiataPrunus dulcis71.8130.4893.93214forward
CNT30185636Vigna radiataSecale cereale74.514.3281.08222forward
CNT30293259Vigna radiataTriticum aestivum74.515.7880.63222forward
CNT30224357Vigna radiataHordeum vulgare58.3911.5282.76174forward
CNT30555950Vigna radiataOryza glaberrima74.514.6582.88222forward
CNT30257804Vigna radiataAvena sativa29.1913.287.3687forward
CNT30311863Vigna radiataCamelina sativa70.8112.9289.1211forward
CNT3060130Vigna radiataArabidopsis lyrata70.8123.0188.63211forward
CNT3083474Vigna radiataBrassica juncea70.816.3288.63211forward
CNT30134355Vigna radiataLolium perenne55.036.5182.32164forward
CNT3018340Vigna radiataZea mays33.227.4388.8999forward
CNT30229832Vigna radiataAnanas comosus67.1117.0188200forward
CNT30655378Vigna radiataRosa chinensis71.1414.2891.51212forward
CNT30689031Vigna radiataTriticum urartu74.53.9881.08222forward
CNT30357951Vigna radiataLactuca sativa64.4320.489.58192forward
CNT30371107Vigna radiataOryza glumipatula60.7442.8982.87181forward
CNT3025585Vigna radiataPopulus trichocarpa59.442.0489.83177forward
CNT30585636Vigna radiataEchinochloa crusgalli32.211.6787.596forward
CNT30604560Vigna radiataOryza punctata74.522.0582.43222forward
CNT30336888Vigna radiataCynara cardunculus71.486.6788.73213forward
CNT30726400Vigna radiataLupinus angustifolius22.824.5591.1868forward

Expression of CNT3086712

Peptides detected in this lncRNA

>peptide 1 (33 aa)
TILARMVCSGTLPSLIHSTRAISFPSIRPAICT*

Sequence

>CNT3086712
ACAATTTTAGCTCGAATGGTTTGTAGCGGAACCCTACCTTCTCTAATCCATTCGACACGTGCAATTTCTTTTCCATCAATACGTCCTGCAATCTGTACTT
GAACTCCTTTTGTACCTGTTTGTTCAGTTAATTCAATAGCTTTTTTCATTGCTTTACGAAATGAAACTCTATTCTTTAATTGTCCAGCTATAAATTCTGC
AAGAATATTAGGGTGTTTATAAGCATTTGTANCTTTTACAATAGCAATGTTTAGTTTTCTATTTACACAATTCAGTTTTTTGTGCATATTTCGTTAAT