Detailed information on CNT30135270


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9C5|RR3_LOLPR, E-value = 1e-123

BLAST vs NONCODE:
NONOSAT001021, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693436Lolium perenneOryza sativa30.620.190.971052forward
CNT30637715Lolium perenneCapsicum annuum3.234.8188.18110reverse complement
CNT30294378Lolium perenneTriticum aestivum22.7738.3690.8783forward
CNT30224357Lolium perenneHordeum vulgare23.0752.5289.53793forward
CNT30396291Lolium perenneTriticum turgidum8.7377.9291.33300reverse complement
CNT30585847Lolium perenneMusa acuminata4.1321.7584.51142forward
CNT30713541Lolium perenneMalus domestica golden2.0132.0991.369reverse complement
CNT30689031Lolium perenneTriticum urartu30.8319.0193.31060forward
CNT30620547Lolium perenneCajanus cajan6.7273.5783.55231forward
CNT30147990Lolium perenneBrachypodium distachyon13.4130.4586.55461reverse complement
CNT30585636Lolium perenneEchinochloa crusgalli29.0317.3992.28998forward

Expression of CNT30135270

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MIYQFSLNLIERGRISSFFQGFSIFFQGFREKKSLVILYFITGQNAMIRLVILRLRISNFLHLILHR*

>peptide 2 (61 aa)
MATQYSGDPFPEPIRVSVGLSVTGLSGNIGTHIFPPRRAYRVIALRPASICLAVIQAGSSA*

>peptide 3 (59 aa)
MMVSFSSRTRNIPLGRASVTKPSKVTFASLGFFFSPIFFCHFYFFSYFSIFIFKIGRSR*

>peptide 4 (58 aa)
MHSARAISFPPRRPAIFTLTPFISAFLVNSMAFFIAFRNETLFFNWKAIYSARMLGSL*

>peptide 5 (46 aa)
MIFLSFFLDVVCEIWFFSGYSRWFFLSSISTAKLDMRVSSHPGPRE*

>peptide 6 (37 aa)
MFSVIFVDITRTVPFLFMSAFRIEVSKSAIVSLPIRL*

>peptide 7 (35 aa)
MVRSEFHNGASKKFLSELIFSVLLIWSALYSLLLL*

>peptide 8 (32 aa)
MQKNERNIVFLERKTGLFFMFNTRLVLGVLYL*

>peptide 9 (33 aa)
MIHLFIYNRRIYSYSDCFLVRISTIRNNRLVSS*

Sequence

>CNT30135270
ACCCTATCCCCCATCAGTATTCGTATAGAACTAGAACGGATCTTTCCTGAAATATAGCCCAGGATGATGGTATCATTCTCTAGCCGAACGCGAAACATTC
CGTTGGGTAGGGCTTCCGTAACTAAACCTTCAAAAGTGACTTTTGCTTCTCTTGGGTTTTTTTTCTCTCCTATTTTTTTCTGTCATTTTTATTTTTTCTC
CTATTTTTCCATTTTTATTTTCAAAATAGGAAGGTCCAGATAGAATTCGGGTACTATAGCCACAACGATTACCATATATAACATCAGACTTCTCCTCCAA
TTCTGTTTAGTCGAGCCTCTCGATCTGTCATTATCCCTCGAGAAGTAGAAAGAATAGCAATTTCCATTCCACCCAAAACTTTAGGAATTCCTTGATAGTT
GGTATAAATTCGTAAGCCGGGTCGGCTTATACGCTTTAAAAAGGTTCTTGTGCTATATATTCCTTTTCTAGTATTTCTCTTTTGATGTCGCAAAGTTGAA
ACCAAGAAATATCTGTTACGTTCCTGATGTTTCCGAACACTTTCAATAAAACCCTCTCGTAGAAGTGTTTTAACAATGTTTTCGGTAATATTTGTAGATA
TTACTCGAACTGTTCCTTTTTTATTCATGTCCGCGTTTCGTATAGAGGTTAGTAAATCAGCAATAGTGTCCTTGCCCATAAGACTCTAATTCTAGGTTCC
TCCAAATTTTTCTATAATCAACATGTTTTCATTTTTTTTTCTTTTCATTTTGGATTTTAAAACATATACGTAAAACACAATCTACTAAATTTATTATTTG
ATCTAAATTTTACTTAACTAGTATTTATAACACTTCAGGAGCTAATGAAACTATTTTGGTAAAATTCAATTCTCTCAATTCTTCGGCAATCGCGCCAAAA
ACTCGAGTTCCTTTTGGATTTCCTTTTTGATCAATTATAACCGCGGCATTGTCATCATAGCGGATTATTATACCATCTTCACATTTGAACTCTTTACATG
TACGTACAATTACAGCTCGAATTACTTCGGATCTTTCTAGGGGCATTTGCGTAATGCGTCTTTAATTACAGCAACAATAACATCACCTATACGAGCATAT
CGCTGAATACCAGCGGCTCCTATGACTCGAATACACATTAATTTTCGAGCTCCACTATTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTAT
TTTGATTTCAATTTGTTTTGTTATTTCAATGCAAAAGAATGAAAGAAATATTGTCTTTTTAGAAAGAAAAACGGGGCTTTTTTTTATGTTCAATACCCGT
TTAGTTTTAGGGGTTCTATATCTCTAATCGAATAAATTGACTTCGTATTGGCATTTTACTGGCAGCTATCTCCATAGCTGCTCTAGCTATAGTTTTGGAT
ACTCCCCCCATTTCATAAAGTATACGACCTGGTTTAACAATGGCTACCCAATATTCGGGGGACCCCTTTCCTGAGCCCATACGTGTTTCTGTGGGTCTTA
GTGTAACCGGTTTGTCGGGAAATATAGGTACCCATATTTTTCCACCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCTGT
GATCCAAGCAGGCTCAAGTGCTTGAAGAGCATATCTACCAAAACAAATACGATTGCCTCGGCATGATTTTCCTTTCATTCTTCCTCGATGTTGTTTGCGA
AATCTGGTTCTTTTCGGGTTATAGTCGATGGTTCTTTCTTAGTTCCATCTCTACTGCAAAACTGGACATGAGAGTTTCTTCTCATCCAGGTCCTCGTGAA
TGAAATGAGAAAGATAGATACACGTTAATAGATAATCGAAAAAGTTAGGTTTTTTTACTCTTATTGAATATTGAATAACGGTAAAGTATTCTAATTCAAT
AAGGATTTCGCGGGCGAATATTTACTCTTTCCTGTCTTAATTTGTTAATTTAAAACCTTACCAAATAAGAAATTTTTTTGGTTTCCTCCGCCATCCCATC
CAATGAAGTATTAGGATTCTTTTCAACAAAATCCTATCGAATCATAGGTTCCGTCGTTCCCACTGCATCTCCTTGAATGGTTAGGTCTGAATTCCACAAT
GGAGCTTCAAAAAAATTTCTTTCCGAATTAATTTTCTCAGTTTTATTAATCTGGTCGGCTCTTTATTCTTTATTATTGCTTTAAATTTATAGTTCTTGTT
TCAAGTTACGATTTCAAATTATCTATTATTTTTATTATATTGATGATTTATCACATTGCTTTTTATGATGCAATTCATAGACCATACATATTGGAATCCT
ATATCTTAACTTAATTCCTCTTCCTTCTTTCTATCATCCCTCCCTTATATCCACATCCCTTTAGTTTTGCTTCACAACCTAGAATCTCATTTATTTTTTA
GAGAAAAATCAGTTGCTACAATTATATGATACATCTATTCATTTATAATAGACGTATTTATTCATATAGTGACTGTTTCTTAGTTAGGATATCAACAATA
AGAAACAATAGGTTGGTTAGTAGTTAATTTTCTATAATTACTAAGTTTTTTCTTAAAAAAATAACGAGTCACACACTAAGCATAGCAATTATATTAAATG
ATTTATCAATTTTCATTAAATCTTATAGAAAGAGGTAGAATTTCTTCTTTTTTTCAGGGATTTTCTATTTTTTTTCAAGGATTTCGGGAAAAAAAGTCTC
TTGTTATTTTATATTTTATCACTGGACAGAATGCTATGATAAGATTAGTTATTCTTCGTCTACGAATATCCAATTTTTTACACCTAATACTCCATAGATA
GTTCGAATTGGATAGCAGCAATAATCAATTTTAGCGCAAATTGTTTGGAGGGGAAGTCTACCCTTTTTGATGCATTCGGCACGTGCAATTTCTTTTCCTC
CGAGACGACCCGCTATTTTTACTTTAACTCCCTTTATATCGGCTTTTTTAGTTAATTCCATGGCTTTTTTCATTGCCTTTCGGAATGAAACTCTATTTTT
TAATTGGAAAGCTATATATTCTGCAAGAATGTTAGGCTCTCTATAAGGCTCTTTAACTTTTTCCGATAGAAATATTAAGTCTCTGGTTTACGGAGTGAAT
TTCCTTTTGTAGATCTTTCTCTAATTCTTCAATTGTACGGAGTGAATTTCCTTTTGTAGATATTTCTCTAATTCTTCAATTGCTCCTTTTTTCTTTAATA
AATTGGGGAATCCAATATGGATTATGACGTGGACCGTATCGATTTCTTTTTGAATTTCTATACGTGTAATTACTTTAGAACTTGAACCTGAGTCATTTTT
TCTATTATGTGTAATTACTTTGGAACTTGAGTCTGATTCTAGTTTTCTATTCGAGCTCTTTTTCCTATTCTTTTGTATATAGTTCTTGATACAATCCCTT
ATTTTCTTATCTTCCAGTAGACCTTCAGAATAATTTTT