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Detailed information on CNT30147499


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ0|RR8_SOYBN, E-value = 6e-78

BLAST vs NONCODE:
NONMEST004486, E-value = 7e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Medicago truncatulaOryza sativa23.86980.85376forward
CNT30641762Medicago truncatulaNymphaea colorata23.4110.6383.2369forward
CNT30550215Medicago truncatulaIpomoea triloba23.678.1585.52373forward
CNT30198977Medicago truncatulaPisum sativum25.3221.4496.49399forward
CNT30541469Medicago truncatulaBrassica napus26.0226.882.93410forward
CNT30555950Medicago truncatulaOryza glaberrima23.8624.8280.85376forward
CNT30310337Medicago truncatulaCamelina sativa20.1819.0386.16318forward
CNT3083474Medicago truncatulaBrassica juncea23.5411.1184.1371forward
CNT30134355Medicago truncatulaLolium perenne22.7814.2680.78359forward
CNT30689031Medicago truncatulaTriticum urartu23.866.7480.05376forward
CNT30351320Medicago truncatulaEragrostis tef6.0939.3484.3896forward
CNT30364284Medicago truncatulaSorghum bicolor3.8724.588.5261reverse complement
CNT30434619Medicago truncatulaPapaver somniferum9.5822.5487.42151forward
CNT30574575Medicago truncatulaVitis vinifera24.1124.984.47380forward
CNT3053857Medicago truncatulaAmborella trichopoda18.4623.2181.79291forward
CNT30576477Medicago truncatulaOryza barthii9.3332.0384.35147forward
CNT30585636Medicago truncatulaEchinochloa crusgalli23.866.5581.38376forward
CNT30116873Medicago truncatulaOryza nivara9.6421.8182.24152forward

Expression of CNT30147499

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MRTAALSSYFIIIPLLRFSSLQVRTITALITSDLSKDEFGTAFLITATTMSPI*

Sequence

>CNT30147499
CCTAAAAAACATGTTTAAAGTTAAAAAATTAAATTAAGTGACTTATACTTCCTTTTTCTCCTTTACCGGTCGTATACATTAAGTACGTTCAATTTTTTTG
TAAACATAGCCTAGAATTTTATTTAAATTCTATTTCTCTAACATGGAACATACCCTCAGAAGTTATTCAGTAATTTAATCTTCATGAATTTTTATTTCTA
TTCTAGTTAAATCCTCTTCACACATTCACTAAGGTATCAGGAGTACATAGTAGAAATCCATTTTTTCTCTACTCCATTTACAATAATGTATATAATTTTT
TCATAGAAATCGGATATCGGCAAATTTACCATTACCATATATAACATAAAACTTCGCCGCCGATTCTTTCTAATCGAGCCTCTCGATCTGTCATTATACC
CCTAGAAGTAGAAAGAATTACAATCCCCATTCCTCCTAAAACTCTCGGAATTTGTTGATAGTTAGAATAGATTCGTAGACCAGGTGTACTGATCCTTTTT
AAATTTAAAAAAGTTTTATACGATTCTTTCCTATTTCTTCTATACCGTAGAGTTAAAACTAAAAAGTATTTGTTGCTTTCTCCATGTTTTCTAACGTTTT
CAACAAAACCCTCTCGTAAAAGTATTTTCACAATGTTTTCGGTGATATTAGTAAGTGGTATTTGAACCGTTCTTTTTCGATTCATGTCAGCATTGCGTAT
CAAAGTTAGCATATCAGCGATAGTATCTTTACCCACGATAGATTATTGCTCCTTACTTTCGATATAATAAACGTGCTCCTAATTCTATTTGTATTTTGTA
TAAAGTATAAAAAAAAAATACAAATAGAATTCTGAATTCGAATTTGTATTTTGAATCTATCTATATATATATTCAATATATATATAGATTTCATTCCTTT
TTCTTTTTTTTTTTTCATCTATTATTATTATTTCGTTTTAAAAATATTTATTAATTAATATAATGACTTACTATTTCTAATAACTTATCGATATGTATAC
TTTTCATATTTATGTAATAATCTTAATATAAATATTCATAATTATAGAATAATGATTACACAAGTATATAAGGTATATATGTGAGATCTAATATATTTAG
GACTCTATTTCACTTCTATTCAAATATATATTCAAATAGATTTCCTTCCTATTCATTCCAGTCCTAAATAATATATCTATATCGCGATCTCGTATTATAA
TACCTCGGGTGCTAATGAAACTATTTTAGTGAAATTTAACTGTCTCAATTCTCGGGCTATTGCGGAAAAAATTCGAGTTCCTTTTGGATTTCCTTCTTTA
TCAATGAGAACCGCCGCATTATCATCATACTTTATTATTATACCATTACTACGTTTTAGTTCTTTACAAGTACGTACAATTACAGCCCTGATCACTTCAG
ATCTTTCTAAAGATGAATTTGGTACTGCTTTTTTGATTACAGCAACAACAATGTCACCAATATAAGCATACCGTCGATTACTAGCTCCTATGATTCGAAT
ACACATTAATTCGCGGGCTCCGCTATTATCGGCTACATTTAAATAGGTTTGAGGTTGAATCATATCATTTTTTTCA