Detailed information on CNT30693436


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENE2|RPOA_ORYNI, E-value = 2e-155

BLAST vs NONCODE:
NONOSAT001021, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637715Oryza sativaCapsicum annuum2.134.8190.91110reverse complement
CNT30585847Oryza sativaMusa acuminata2.9823.8985.9156forward
CNT30598237Oryza sativaFraxinus excelsior4.4337.7281.9232forward
CNT30135270Oryza sativaLolium perenne29.5945.0691.81549forward
CNT30714122Oryza sativaMalus domestica golden2.2428.3386.32117forward
CNT30689031Oryza sativaTriticum urartu33.3831.3392.671747forward
CNT30620547Oryza sativaCajanus cajan4.5375.4883.54237forward
CNT30585636Oryza sativaEchinochloa crusgalli30.6827.9895.581606forward

Expression of CNT30693436

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MIDLLIYDRCIYSYSDCFLVRISTIRSNRLVISSFSIIT*

>peptide 2 (63 aa)
MMVSFSRRTRNIPLGRASITKPSKVIFASLGFFFSLLFFFSVIFFFLLFFFFYFQIKKRCIFV*

>peptide 3 (58 aa)
MHSARAISFPARRPAIFTFTPFISVFLVNSMAFFIAFRNETLFFNWKAIYSARMLGCL*

>peptide 4 (46 aa)
MELPKNFFPSQFLSFINSGRSLLFLEICISCFNQITISNSLLFLLY*

>peptide 5 (39 aa)
MLYHIAFYDVIHRPYILESYIFLISLPSFYHPSFYLHPL*

>peptide 6 (31 aa)
MKEILSFQKEEPGFLFSILLFLGGYISNRRN*

>peptide 7 (33 aa)
MARNAASLPLPAPFTITSARCKPTVRIASTAVL*

>peptide 8 (30 aa)
MQKDERNIVFPERRTWFFIFNTTFFGGLYF*

>peptide 9 (30 aa)
MFSFFFSFWILKHIRETQSTNFLFDLYLVY*

>peptide 10 (38 aa)
MLRIGTNDSNSSTPTNQSTFCTNFTNRSSYFHISVFLS*

>peptide 11 (34 aa)
MTLIRPRLRISRHFVQILRTEALIFIFPYSFLKL*

>peptide 12 (37 aa)
MFSVIFVDTTRTVPFLFMSAFLIEVSKSAIVSLPIRL*

Sequence

>CNT30693436
GAAACGAGTACCCTCTTCCTCCGTGTGAAGAAAAGGAAGAAATAAATCAATCAAATTACGAGAAGCCTCATAAAGCGCTTCCTTAGGGGTTAAACTTCCA
TTGGTCCATATTTCTAGAAAAAGTATCTCATATTTTGCATTTCCATTCCCACAAGCAAAAATACTATAATTCACATTTCGAACAGGCATGGATACAGCAT
CTATAGGATAACTTCCATCTTGAGTGTTCTTTCTGACTTCCGTGTGATATCCGCGATCTCTCTTGATCCGTAACTCAATACGGAAATCCGTGGGTTCTGT
CAAGTTAGCTATAGGTTGTGCCGTATCAACGATTTCTACGGAAGGCGGTAAGATAATATCTTGGGCAGTTATGTATCTAGGACCTTTGACGCAAATTGAT
GCGGTTCTAACTCCATAGAGATTACTTCTCAATACAATTTCTTTCAAATTTAGTAAAATTTCTTGTACCGATTCTTCAATACCTGCTATTGTAGAATATT
CGTGCGGCACGCTCCCAAATTTTGCATGTGTGATACATGTTCCTTCTGTTTCTCCAAGTAAAGCTCTTCGCAAGGCAATACCAACGGTATCCGCTTGACC
TTTTCTAAGCGGGGACAGAATGAAACGACCATAATAAAGACGCTTACTATCTACTCTTGATTCAACACACTTCCACTGTAGTGTTTGAGTGGATCCTGCT
ACCTCCTCTCGAACCATATAGACTAGTATTATTATTTGATCATTGAATCATTTATTTCTCTTGAAAGGGGTTTAATTCTTTTACAGACGTCTTTTTTTAG
GAGGTCGACACCCATTATGCGGCATAGGTGTTACATCGCGTATACAACTTAATCGTACACCACTTTTAGCAATGGCTCGTAATGCGGCATCTCTTCCACT
ACCAGCACCCTTTACCATAACTTCTGCTCGTTGCAAACCCACTGTACGAATAGCATCTACAGCTGTTCTTTGACCAGCATAGGGTGATGCTTTTCTTGAG
CTTTTGAATCCACAAGTACCCGCGGAGGACCAGAAAACCACCCGACCTTGCGGATCTGTAACAGTTATAATAGTATTGTTGAAACTAGCTTGAACATGAA
TAACTCCTTTTGTTATTCTACGTGCACTCTTCCGTAAACTAAAACGCGCATTCCTACGCAAACCAATACGTACTTTCATACGTGAACCAATTTTTGGTAT
AGCTTTTGTCATATTTTATTATCTCATAAATATGAGTTAGAAATAACAAAAAGAAAAAAAGATACAAAGATATCCGTTTCAGGGTAAAATATATCCTTTA
CTTGAATTTTTTTATTTGGAATTTGGACATTTTCGCGGGTACTTTTTTTTTTACTTTTTAGAAAGTCAAGTTCTTTTTTCGAAAGATTACCCCTGTCTTT
GTTTATGCTTCGGATTGGAACAAATGACTCTAATTCGTCCACGCCTACGAATCAGTCGACATTTTGTACAAATTTTACGAACAGAAGCTCTTATTTTCAT
ATTTCCGTATTCCTTTCTTAAACTATGAATTTACTCTTTTGGAAAAAATAAGTCTCTTTGTTTGAATTTTAGAACTTTGAATTTTTTACCCTAGAAAAAA
AAAAGAAAAACCTAACCCTTTGAATCTTTGGTATCCTTCAAATCTTCGGTATCCTTCGAGTCTTCGGTACGCTTCGAATCCTTATGGGGAAGTCTATAAA
TTATACGCCCCTTGCTTGAATCATAACGACTTACTTCAATTTTGACCCTATCCCCCATCAGTATTCGTATAGAACTAGACCGGATCTTTCCTGAAATATA
GCCCAGGATGATGGTGTCATTCTCTAGGCGAACGCGGAACATTCCGTTGGGTAGGGCTTCCATAACTAAACCCTCGAAAGTAATTTTTGCTTCTCTCGGG
TTTTTTTTTTCTCTCCTATTTTTCTTTTCTGTCATATTTTTTTTTCTCCTATTTTTCTTTTTTTATTTTCAAATAAAAAAACGTTGTATTTTTGTTTGAA
AAATAGGAAGTTCAAGATAGAATTTGGGTACTATAACTATAGGTGGGGCGATTACCGCTATAGGCGGGGCGATTACCATATATAACATAAGACTTCTCCC
CCAATTCTGTTTAGTCGAGCTTCTCGATCTGTCATTATACCTCGAGAAGTAGAAAGAATAGCAATTCCCATTCCGCCCAAAACCTTAGGAATTCCTTGAT
AGTTGGCATAAATTCGTAAGCCAGGTCGGCTGATACGCTTTAAAAAGGTTCTAGTTCTATATATTCCCTTTCTAGTCTTTCTCTTTTGATGTCGCAAAGT
TGAAACCAAGAAATATCTGTTACTTTCCTGATGTTTCCGAACACTTTCAATAAAACCCTCTCGTAGAAGTATTTTAACAATGTTTTCGGTAATATTTGTA
GATACTACCCGAACAGTTCCTTTTTTATTCATGTCCGCGTTTCTTATAGAGGTTAGTAAATCAGCAATAGTGTCCTTGCCCATAAGACTCTAATTCTAGG
TTCCTCCTAATTTTTCTATAATCAACATGTTCTCTTTTTTCTTTTCGTTTTGGATTCTAAAGCATATACGTGAAACACAATCTACTAATTTTTTATTTGA
TCTATATCTTGTCTACTAGTATTTATAATACTTCAGGAGCTAATGAAACTATTTTAGTAAAATTCAATTCTCTCAATTCCTCGGCGATCGCGCCAAAAAC
GCGAGTTCCTTTTGGATTTCCTTTTTGATCAATGATAACCGCTGCATTGTCGTCATAGCGTATTATTATACCGTCTTCGCATTTGAACTCTTTACATGTA
CGTACAATTACAGCTCGAATTACTTCGGATCTTTCTAGAGGCATTTGGGGCACTGCGTCTTTGATTACAGCAACAATAACATCACCAATACGAGCATATC
GCTGATTACTAGCAGCTCCTATGACTCGAATACACATCAATTTTCGAGCTCCACTGTTATCTGCTACATTTAAAAGGGTCTGAGGTTGAATCATATTATT
TTGATTTCAATTTGTTATTTCAATGCAAAAGGATGAAAGAAATATTGTCTTTCCAGAAAGAAGAACCTGGTTTTTTATTTTCAATACTACTTTTTTTGGG
GGGTTATATTTCTAACCGAAGAAATTGACTTCGTATGGGCATTTTGCTGGCAGCTATGGAAATAGCTGCTCTAGCTACAGTTTCGGATACTCCGCCCATT
TCATAAAGTATTCGACCTGGTTTAACAACGGCTACCCAATATTCGGGGGATCCCTTTCCCGAACCCATACGTGTTTCGGTCGGTCTTATTGTAACCGGTT
TGTCGGGAAATATACGTACCCAGATTTTTCCACCACGACGTGCATATCGTGTCATTGCTCTTCGTCCTGCTTCTATCTGCCTCGCCGTAATCCAAGTGGG
TTCAAGTGCTTGAAGAGCATATCTACCAAAACAAATACAATTGCCTCGGTAGGATTTTCCCTTCATTCTTCCTCTATGTTGTTTACGAAATCTGGTTCTT
TTGGGGTTATAGTCGATGGTTCTCTCTTAGTTCCATCTCTACTGCAAAACTGGACATGAGAGTTTCTTCTCATCCAGCTCCTCGCGAATCAAATGAGAAA
GTGTGCAAATTTCTCTAATTCCACAATATTCTAAAATATTACGGATAGATACACATTAATAGGAAAGGTTAGGGTTTTTAATATTGAATTTATTAAAATA
CTAAAATATATAGTCAAGAAAGAGGATCTAGAATATATCTAGATGTGTATGTTTATTTATCTATATTCTATATTTAATGTAATTCTTTTTTTTTTTTAAT
CTCCTTTTTTTATTTTACTCTTATTGAATCGCGGTAAAGTATTCTAATTCAATAAAAATTTCGCGGGCGAATATTTACTCTTTCCTGTCTTATTTGTTAA
TTCATAACCTTATCAAATAAGACAATTTTTTTGGTTTGTTCCGCCATCCCACCCAATGAAGTATTGGGATTCTTTTCAAGAAAATCCTATCCAGTCATAG
GTTCTGTCGTTCCCACTGCTTCTCCTTTAATGGTTAGGTTTGAATCTCGCAATGGAGCTTCCAAAAAATTTCTTTCCGAGTCAATTTCTCAGTTTTATTA
ACTCGGGACGCTCTTTGTTATTCCTTGAAATTTGTATTTCTTGTTTCAATCAAATTACGATTTCGAATTCTCTGTTATTTTTATTATATTGATGCTTTAT
CACATTGCTTTTTATGATGTAATTCATAGACCATACATATTGGAATCCTATATCTTTCTTATTTCTCTTCCTTCTTTCTATCATCCTTCCTTTTATCTAC
ATCCCCTTTAGTTTTGCTTCACAACTTAGAATCCTATTTTTTTTTAAAGAAAAAATTGCAGTTGCTACACGTATATGATAGATTTACTCATTTATGATAG
ATGTATTTATTCATATAGTGACTGTTTCTTAGTTAGGATCTCGACAATACGAAGCAATAGGTTGGTTATTAGTTCATTTTCTATAATTACATAGTAGGGT
TCATTCTATTTTTTTTTAATCCCCTTTTTGAACCCTAAAAAAAAACTAACGAGTCACACACTAAGCATAGCAATTTTATTAAAAGATTTCTCAATTTTCA
TTAAATCTTATAGAAAGAGGTAGAATTTCTTCTTTTTTTCAGGGATTTTAGGGAAAATAAGGCTCTTGTCATTTTTTATTCTATTACTGAACAGAATGGG
AAGACAGGGTTGGTTATTCTTCGTCTACGAATATCCAAATTTTAACTCCTAATACTCCATAGATAGTTCGAATTGGATAGCAGCAATAATCAATTTTAGC
GCGAATTGTTTGGAGGGGAAGTCTACCTTTTTTGATGCATTCGGCACGCGCAATTTCTTTTCCCGCGAGACGGCCTGCAATTTTTACTTTTACTCCCTTT
ATATCTGTTTTTTTAGTTAATTCAATGGCTTTTTTCATTGCCTTTCGGAATGAAACTCTATTTTTTAATTGGAAAGCTATATATTCTGCAAGAATGTTAG
GTTGTCTATAAGGTTCTTTCACTTTTTCGATCCCAATATTAAGTCTCTGGTTTACAGAATTAACTTCTTTTTGTAGATCTTTCTCTAATTCTTCGATTGC
TCCTTTTTTCTTTAATAAATTGGGGAATCCAATATGGATTATGACGTGGATTGTATCGATTTCTTTTTGAATTTCTATATGTGTAATTACTTCGGAACTT
GAGCCTGAGTCCATTTTTTTATTAGGCATAACAA