Detailed information on CNT30585847


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693436Musa acuminataOryza sativa21.292.6688.49139forward
CNT30641762Musa acuminataNymphaea colorata20.673.8985.93135forward
CNT30506309Musa acuminataNicotiana attenuata18.0722.9688.98118reverse complement
CNT30294378Musa acuminataTriticum aestivum21.446.8687.86140reverse complement
CNT30224357Musa acuminataHordeum vulgare21.449.2785.71140forward
CNT30396291Musa acuminataTriticum turgidum22.3637.9283.56146reverse complement
CNT30553747Musa acuminataOryza glaberrima21.299.7787.05139reverse complement
CNT30667649Musa acuminataTriticum dicoccoides9.492090.3262forward
CNT30135270Musa acuminataLolium perenne21.754.1384.51142forward
CNT30229743Musa acuminataAnanas comosus20.2155.9395.45132forward
CNT30689031Musa acuminataTriticum urartu21.442.5187.86140forward
CNT30344054Musa acuminataEragrostis tef20.9825.0585.4137reverse complement
CNT30705533Musa acuminataPrunus avium24.518.685160reverse complement
CNT30118482Musa acuminataCitrus clementina10.8728.1787.3271reverse complement
CNT30147990Musa acuminataBrachypodium distachyon21.299.1883.45139reverse complement

Expression of CNT30585847

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MNYSDSFSVESYAVTGSVVPIASPLMVRPELCNGAPNKIPSRVNLLSFY*

>peptide 2 (45 aa)
LDPYFYPYQMMPKYCNVISINKGFAGEYLLFTVLFLGQPMTSQNK*

>peptide 3 (43 aa)
MELPTKFLLESISLVFINPRLFIIIYIIYIHSVLMLYHIAFMR*

>peptide 4 (31 aa)
MIDPLISYSDCFLGSRQYEAISWLLVYFVFIF

Sequence

>CNT30585847
TCCTTGATCCTTATTTTTACCCTTATCAAATGATGCCAAAATATTGTAATGTAATCTCAATAAATAAAGGTTTCGCGGGCGAATATTTACTCTTTACTGT
TTTATTCCTAGGTCAACCCATGACTTCTCAGAATAAATAAATTTTTTCTCGGTTCGTTCCGCCATCCCACCCAATGAATTATTCGGATTCGTTTTCAGTA
GAATCCTATGCAGTCACAGGTTCCGTCGTTCCCATAGCTTCTCCGTTAATGGTTAGGCCTGAACTCTGCAATGGAGCTCCCAACAAAATTCCTTCTCGAG
TCAATCTCCTTAGTTTTTATTAACCCGAGGCTCTTTATTATTATTTATATTATTTATATTCATTCAGTATTGATGCTTTATCACATTGCCTTTATGAGGT
AATTCATAGACCATACATATTGGAATCATATATCATTGATATTTTTGTTCTCTCTTTCTATCATCCTTCCATTTATCCACATCCCTTTATTTTTGTTTCA
CAACCCATAATCAGATTTTTTATGGAAAAGATTTTAGTTGCAGTTGCTGCAACTATATGATTGATCCACTCATCTCATATAGTGACTGTTTCTTGGGATC
TCGACAATACGAAGCAATAAGTTGGTTATTAGTTTATTTTGTTTTTATTTTTG