Detailed information on CNT30637715


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693436Capsicum annuumOryza sativa34.812.190.91110reverse complement
CNT30641762Capsicum annuumNymphaea colorata37.973.4693.33120reverse complement
CNT30405603Capsicum annuumBeta vulgaris21.28.7795.5267reverse complement
CNT30553747Capsicum annuumOryza glaberrima33.867.5288.79107forward
CNT30598237Capsicum annuumFraxinus excelsior25.9513.3386.5982reverse complement
CNT30135270Capsicum annuumLolium perenne34.813.288.18110reverse complement
CNT30229832Capsicum annuumAnanas comosus21.25.795.5267reverse complement
CNT30655378Capsicum annuumRosa chinensis21.24.5197.0167reverse complement
CNT30689031Capsicum annuumTriticum urartu35.442.0188.39112reverse complement
CNT30357951Capsicum annuumLactuca sativa21.27.1210067reverse complement
CNT30574575Capsicum annuumVitis vinifera21.24.3910067reverse complement
CNT30119130Capsicum annuumCitrus clementina32.9110.8293.27104reverse complement
CNT30585636Capsicum annuumEchinochloa crusgalli34.811.9290.91110reverse complement
CNT30336888Capsicum annuumCynara cardunculus37.663.7393.28119reverse complement

Expression of CNT30637715

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MEDKMRKVRLCWFGHVMKKDFGAPVRRCETLVMDDFKRGRGRPKKY*

>peptide 2 (33 aa)
NSHVRFCSRDGIQKQPSTITPKEPDSVNNIEEE*

Sequence

>CNT30637715
GAAACTCTCACGTCCGGTTCTGTAGTAGAGATGGAATTCAGAAACAACCATCAACTATAACCCCAAAAGAACCAGATTCCGTAAACAACATAGAGGAAGA
ATGAAGGGAATATCTTATCGAGATAGGGTGAGGAATCAGATTATTTGCAAAAGGTGAGAGCTACTTCGATGGAGGACAAGATGCGAAAAGTGAGGTTATG
TTGGTTTGGGCACGTGATGAAGAAGGATTTCGGTGCTCCAGTGCGGAGGTGTGAGACACTCGTTATGGATGATTTTAAGCGGGGTAGAGGTAGGCCGAAG
AAATATTGAAGGGAAA